Non-Coding RNA Search

Ss1.1-rnje03c_n18.5

Sequence:


               
               AAGTACTGTGTATTTCCCTTCTCTTCTGGTAGGGGATTCAGAGAGGGCTCTGGTCCCAGG
CCTGGCCTCTCCAAGCACCCTGCCTCCCACATACCTTGTTTGTTCTTGGGACAGAGCCAA
GTCATTGCTGTGGACAAGGGAGAAGCTGCCATCTGCCTGACCCATGAGAATGCCCAGAGG
TAGGGGGGCAGAGTTGTGGGAGGCAGATTTGGGGGCCTGATCTCAACACCTGTCCAGGTA
TCAAACCCACCGATGTCCATACCCACGAAGGAAGAGGCAGTGGAGGTGGCCTAGCGTAGG
TCCCACAGGTTTACAGATGGACAGTGGACACCTGTATCTTGCCAGTCTAAGGAGGGTTTA
TTCTCCCAGTATTTGTAGCCAAGGGTAGGAGCCTGCCTTCCCTGATCTCCCCCCTCCTGC
CACAACCCATGCTCACCTTTGCTTTCCTGTTGCTCCAGGCTTCAGTTACAGGACAGGATT
CGGATCATCCCGCTCGATGTGACCTTAGAGCAGAACTGGGCGCACCTTCTACCCTGGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTACTGTGTATTTCCCTTCTCTTCTGGTAGGGGATTCAGAGAGGGCTCTGGTCCCAGG
CCTGGCCTCTCCAAGCACCCTGCCTCCCACATACCTTGTTTGTTCTTGGGACAGAGCCAA
GTCATTGCTGTGGACAAGGGAGAAGCTGCCATCTGCCTGACCCATGAGAATGCCCAGAGG
TAGGGGGGCAGAGTTGTGGGAGGCAGATTTGGGGGCCTGATCTCAACACCTGTCCAGGTA
TCAAACCCACCGATGTCCATACCCACGAAGGAAGAGGCAGTGGAGGTGGCCTAGCGTAGG
TCCCACAGGTTTACAGATGGACAGTGGACACCTGTATCTTGCCAGTCTAAGGAGGGTTTA
TTCTCCCAGTATTTGTAGCCAAGGGTAGGAGCCTGCCTTCCCTGATCTCCCCCCTCCTGC
CACAACCCATGCTCACCTTTGCTTTCCTGTTGCTCCAGGCTTCAGTTACAGGACAGGATT
CGGATCATCCCGCTCGATGTGACCTTAGAGCAGAACTGGGCGCACCTTCTACCCTGGGGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-508, gnl|bosTau2|chr22 (38841231-38841728)
               

               
               4-508, gnl|Hg17|chr3 (50589827-50590310)
               

               
               4-508, gnl|Mm7|chr9 (107060695-107060221)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-508, gnl|bosTau2|chr22 (38841231-38841728)
               

               
               4-508, gnl|Hg17|chr3 (50589827-50590310)
               

               
               4-508, gnl|Mm7|chr9 (107060695-107060221)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nje (0.16592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)

	4-508, gnl\|bosTau2\|chr22 (38841231-38841728)
	4-508, gnl\|Hg17\|chr3 (50589827-50590310)
	4-508, gnl\|Mm7\|chr9 (107060695-107060221)