Non-Coding RNA Search

Ss1.1-rnje07c_j19.5

Sequence:


               
               CCGAAGGCCAGCCCAGGTCTTGTTCCGGGCCCTCTGCTGGGCAGCCCTCACCTGGTGGGC
TGGAGGAGCTGCCTGCACACACAGCCATTCTCCTTACTGGCCGCTGCCTCCATCCTGCAC
CTCGGGTTGCTCTGCCAGCCCTGCTGTGTCCGGGGCCACCCTCTGCCGCGAGGACTCCGC
CATCTGGGCGAGGCCCTCGAGGTCCCTGGGCAGGACATGACCCATCAACCCTGGCCTGCT
GATCCCCGGCATCACCCCTCCTGTGGACTGAGAAACTGAGGCCCAAGCAGGCCTGGGACT
GGTCCAAGGCACCTAAGGAGACAGTGGCAGAGCCAGCCCTGGAAACCGCCTCTCCTGCCC
ATGGCCGGTGATGGCCTCTGCCAGTGAAGCAGAATCCGGTTCTGGAGAGCAGATGCCTGA
AAATGTTATCAATTCTTCGTTCCACAGAGAACACACCTCCCATCCGCACCCGCCCCCAGC
CTCTACCACCACTGGTAGCCCAGTTACCTTCCAGGTGTGTCCCCCAGGTGCCCTGTGTTC
TGGTTTACCCACATCACGAGAAAGTGATGGCTGAAGGTGACCCCTCTCTAGGGAAGTTAC
AAATACAAACATGCAAGGCTCCCCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGAAGGCCAGCCCAGGTCTTGTTCCGGGCCCTCTGCTGGGCAGCCCTCACCTGGTGGGC
TGGAGGAGCTGCCTGCACACACAGCCATTCTCCTTACTGGCCGCTGCCTCCATCCTGCAC
CTCGGGTTGCTCTGCCAGCCCTGCTGTGTCCGGGGCCACCCTCTGCCGCGAGGACTCCGC
CATCTGGGCGAGGCCCTCGAGGTCCCTGGGCAGGACATGACCCATCAACCCTGGCCTGCT
GATCCCCGGCATCACCCCTCCTGTGGACTGAGAAACTGAGGCCCAAGCAGGCCTGGGACT
GGTCCAAGGCACCTAAGGAGACAGTGGCAGAGCCAGCCCTGGAAACCGCCTCTCCTGCCC
ATGGCCGGTGATGGCCTCTGCCAGTGAAGCAGAATCCGGTTCTGGAGAGCAGATGCCTGA
AAATGTTATCAATTCTTCGTTCCACAGAGAACACACCTCCCATCCGCACCCGCCCCCAGC
CTCTACCACCACTGGTAGCCCAGTTACCTTCCAGGTGTGTCCCCCAGGTGCCCTGTGTTC
TGGTTTACCCACATCACGAGAAAGTGATGGCTGAAGGTGACCCCTCTCTAGGGAAGTTAC
AAATACAAACATGCAAGGCTCCCCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               14-270, gnl|bosTau2|chr19 (18943650-18943908)
               

               
               14-270, gnl|Hg17|chr17 (3529591-3529889)
               

               
               14-270, gnl|Mm7|chr11 (73252831-73252596)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-270, gnl|bosTau2|chr19 (18943650-18943908)
               

               
               14-270, gnl|Hg17|chr17 (3529591-3529889)
               

               
               14-270, gnl|Mm7|chr11 (73252831-73252596)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               nje (0.16592)
               

               
               nbm (0.0993246)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)
               

               
               nbm (0.0993246)

	14-270, gnl\|bosTau2\|chr19 (18943650-18943908)
	14-270, gnl\|Hg17\|chr17 (3529591-3529889)
	14-270, gnl\|Mm7\|chr11 (73252831-73252596)