Non-Coding RNA Search

Ss1.1-rnje09c_b15.5

Sequence:


               
               CCTGCAGGAGCCACTGAAAGCGGAGAGCTGTCGTGAGGAGTTGCCACCATGTCGGGGAAA
GTTGAGATTATGAACATGGACATGAAGGTGGGGAAAACCCTGAAGATCAAGGGCAAGATC
GATGATGACGCTGATGGCTTTGTCATCAACCTGGGCCAGGGGACAGACAAACTGGCCCTG
CACTTCAACCCACGTTTCGGTGAATCCACCATCGTCTGCAACTCACGGGATGGCAACAGT
TGGGGGAAGGAGCAACGAGACAGTCACATGTGCTTCAGCCCAGGGTCAGAGGTCAAGCTC
ATCGTGACCTTCGAGGAGGATGGATTCAAGGTGAAGCTGCCAGACGGGCACCAGCTGACC
TTTCCCAATAGGCTGGGCTACAGCCACCTGAGCTACCTGAGCGTGCAGGGCGGGTTCAAC
ATTACCTCTTTCAAGCTAGACTGAGGGCCGAGCCGGGCCAGATTGCAAGTTCCCAGAGCG
GATGCCTGAGCCCAAGCCGCCTCCAGCCACGGGGGCCCAGCCGCCCTCGGTCCTGGGTTC
CTACCTGCTGTTCCTAAGCCTCCGCCTTCATTCCCCTCCCCCAAGGCCAAGAACCAAAAA
AAGAACCCGCCTTTCGAGTCTTTCTGGTGGTAGGAACTGTGATGTTTCCACTATTTTAAT
GCTCCCAGCATCCTTAGGAAACAGACAAGAAAACGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGCAGGAGCCACTGAAAGCGGAGAGCTGTCGTGAGGAGTTGCCACCATGTCGGGGAAA
GTTGAGATTATGAACATGGACATGAAGGTGGGGAAAACCCTGAAGATCAAGGGCAAGATC
GATGATGACGCTGATGGCTTTGTCATCAACCTGGGCCAGGGGACAGACAAACTGGCCCTG
CACTTCAACCCACGTTTCGGTGAATCCACCATCGTCTGCAACTCACGGGATGGCAACAGT
TGGGGGAAGGAGCAACGAGACAGTCACATGTGCTTCAGCCCAGGGTCAGAGGTCAAGCTC
ATCGTGACCTTCGAGGAGGATGGATTCAAGGTGAAGCTGCCAGACGGGCACCAGCTGACC
TTTCCCAATAGGCTGGGCTACAGCCACCTGAGCTACCTGAGCGTGCAGGGCGGGTTCAAC
ATTACCTCTTTCAAGCTAGACTGAGGGCCGAGCCGGGCCAGATTGCAAGTTCCCAGAGCG
GATGCCTGAGCCCAAGCCGCCTCCAGCCACGGGGGCCCAGCCGCCCTCGGTCCTGGGTTC
CTACCTGCTGTTCCTAAGCCTCCGCCTTCATTCCCCTCCCCCAAGGCCAAGAACCAAAAA
AAGAACCCGCCTTTCGAGTCTTTCTGGTGGTAGGAACTGTGATGTTTCCACTATTTTAAT
GCTCCCAGCATCCTTAGGAAACAGACAAGAAAACGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|2833360|sp|Q29373|LEG2_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|2833360|sp|Q29373|LEG2_PIG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               296-694, gnl|bosTau2|chr5 (67389510-67389887)
               

               
               296-694, gnl|Hg17|chr22 (36290921-36290298)
               

               
               296-694, gnl|Mm7|chr15 (78934104-78933736)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               296-694, gnl|bosTau2|chr5 (67389510-67389887)
               

               
               296-694, gnl|Hg17|chr22 (36290921-36290298)
               

               
               296-694, gnl|Mm7|chr15 (78934104-78933736)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               eje (3.26151)
               

               
               jej (1.58275)
               

               
               nje (1.32736)
               

               
               ill (0.877963)
               

               
               nco (0.808669)
               

               
               duo (0.691204)
               

               
               cje (0.165235)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (3.26151)
               

               
               jej (1.58275)
               

               
               nje (1.32736)
               

               
               ill (0.877963)
               

               
               nco (0.808669)
               

               
               duo (0.691204)
               

               
               cje (0.165235)

	296-694, gnl\|bosTau2\|chr5 (67389510-67389887)
	296-694, gnl\|Hg17\|chr22 (36290921-36290298)
	296-694, gnl\|Mm7\|chr15 (78934104-78933736)

	eje (3.26151)
	jej (1.58275)
	nje (1.32736)
	ill (0.877963)
	nco (0.808669)
	duo (0.691204)
	cje (0.165235)