Ss1.1-rnje09c_e2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGCTAATCTTTGCAGCTCATTCCAAATGTGGACATTTAAGACTGGGATGACAATGAAA CGCTTCTTGTTTTTGGCTGTTGCTTCTGGCTTCCTGCCTGTTTTGATTGTACAAGCAAAA CCAGCTCAAGTTCCATATAAAACACTCCTTACAGAATTGGCCACAGTCCAGGAAGAAATA GTTACTGTACATAACACTTTCAGGAGAGGAGTATCTCCACCGGCCAGCAACATGCTGAAA ATGAACTGGAGCGAAGAAGCTGCACAAAATGCCAGAATGTTGTCAAAGGATTGTGAATTC GTAGAGAGCAATGCGCTTAAGAGGAGAATTACAAATACTTTTTGTGGAGAAAATAGGTAT TTGACAACTGATCCAGTCTCATGGTCAAATGTCATCAGAATCTGGTACAGTGAGTCCAAA TATTTCAAGTATGGGGAATGGACGTTAACAGACGATGATGTGACAGTTGAGCATTACACT CAGATTGTTTGGGCTACTTCTTACCTCATTGGCTGTGGCCTATCGTCATGTGGTAAAGGA AAGTCAGCTCATTATCTCTACATCTGTCACTATTGTCATGAGGGAAATGATCCTAACAAA AAGAATGAACCTTATCGTAGGGGAACTCCATGTGGAGACTGCCCAGACTACTGTGAAAAT AAACTTTGTACGAACCCCTGCCTCTACTATGATGAGTACAGCAACTGTAAGGCACAAACA CGAGGTCCTGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGCTAATCTTTGCAGCTCATTCCAAATGTGGACATTTAAGACTGGGATGACAATGAAA CGCTTCTTGTTTTTGGCTGTTGCTTCTGGCTTCCTGCCTGTTTTGATTGTACAAGCAAAA CCAGCTCAAGTTCCATATAAAACACTCCTTACAGAATTGGCCACAGTCCAGGAAGAAATA GTTACTGTACATAACACTTTCAGGAGAGGAGTATCTCCACCGGCCAGCAACATGCTGAAA ATGAACTGGAGCGAAGAAGCTGCACAAAATGCCAGAATGTTGTCAAAGGATTGTGAATTC GTAGAGAGCAATGCGCTTAAGAGGAGAATTACAAATACTTTTTGTGGAGAAAATAGGTAT TTGACAACTGATCCAGTCTCATGGTCAAATGTCATCAGAATCTGGTACAGTGAGTCCAAA TATTTCAAGTATGGGGAATGGACGTTAACAGACGATGATGTGACAGTTGAGCATTACACT CAGATTGTTTGGGCTACTTCTTACCTCATTGGCTGTGGCCTATCGTCATGTGGTAAAGGA AAGTCAGCTCATTATCTCTACATCTGTCACTATTGTCATGAGGGAAATGATCCTAACAAA AAGAATGAACCTTATCGTAGGGGAACTCCATGTGGAGACTGCCCAGACTACTGTGAAAAT AAACTTTGTACGAACCCCTGCCTCTACTATGATGAGTACAGCAACTGTAAGGCACAAACA CGAGGTCCTGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 111-243, gnl|bosTau2|chr23 (19576935-19577067) | |
| 111-243, gnl|canFam2|chr12 (20688271-20688386) | |
| 111-243, gnl|dasNov1|scaffold_9861 (17568-17474) | |
| 111-243, gnl|echTel1|scaffold_161249 (1144-1258) | |
| 111-243, gnl|hg17|chr6 (49895267-49895405) | |
| 111-243, gnl|Hg17|chr6 (49927805-49927673) | |
| 111-243, gnl|loxAfr1|scaffold_3931 (60575-60464) | |
| 111-243, gnl|mm7|chr1 (18323250-18323377) | |
| 111-243, gnl|Mm7|chr1 (18323407-18323272) | |
| 111-243, gnl|oryCun1|scaffold_159851 (15399-15510) | |
| 111-243, gnl|panTro1|chr5 (50697387-50697525) | |
| 111-243, gnl|rheMac2|chr4 (49539471-49539609) | |
| 111-243, gnl|rn3|chr9 (16987025-16987143) | |
| 335-483, gnl|bosTau2|chr23 (19582132-19582280) | |
| 335-483, gnl|canFam2|chr12 (20677805-20677977) | |
| 335-483, gnl|dasNov1|scaffold_38411 (6324-6164) | |
| 335-483, gnl|echTel1|scaffold_257005 (2720-2878) | |
| 335-483, gnl|hg17|chr6 (49922189-49922355) | |
| 335-483, gnl|Hg17|chr6 (49922340-49922192) | |
| 335-483, gnl|loxAfr1|scaffold_132915 (5296-5459) | |
| 335-483, gnl|mm7|chr1 (18317872-18318038) | |
| 335-483, gnl|Mm7|chr1 (18318023-18317875) | |
| 335-483, gnl|panTro1|chr5 (50730262-50730428) | |
| 335-483, gnl|rheMac2|chr4 (49565913-49566079) | |
| 335-483, gnl|rn3|chr9 (16982938-16983104) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 111-243, gnl|bosTau2|chr23 (19576935-19577067) | |
| 111-243, gnl|canFam2|chr12 (20688271-20688386) | |
| 111-243, gnl|dasNov1|scaffold_9861 (17568-17474) | |
| 111-243, gnl|echTel1|scaffold_161249 (1144-1258) | |
| 111-243, gnl|hg17|chr6 (49895267-49895405) | |
| 111-243, gnl|Hg17|chr6 (49927805-49927673) | |
| 111-243, gnl|loxAfr1|scaffold_3931 (60575-60464) | |
| 111-243, gnl|mm7|chr1 (18323250-18323377) | |
| 111-243, gnl|Mm7|chr1 (18323407-18323272) | |
| 111-243, gnl|oryCun1|scaffold_159851 (15399-15510) | |
| 111-243, gnl|panTro1|chr5 (50697387-50697525) | |
| 111-243, gnl|rheMac2|chr4 (49539471-49539609) | |
| 111-243, gnl|rn3|chr9 (16987025-16987143) | |
| 335-483, gnl|bosTau2|chr23 (19582132-19582280) | |
| 335-483, gnl|canFam2|chr12 (20677805-20677977) | |
| 335-483, gnl|dasNov1|scaffold_38411 (6324-6164) | |
| 335-483, gnl|echTel1|scaffold_257005 (2720-2878) | |
| 335-483, gnl|hg17|chr6 (49922189-49922355) | |
| 335-483, gnl|Hg17|chr6 (49922340-49922192) | |
| 335-483, gnl|loxAfr1|scaffold_132915 (5296-5459) | |
| 335-483, gnl|mm7|chr1 (18317872-18318038) | |
| 335-483, gnl|Mm7|chr1 (18318023-18317875) | |
| 335-483, gnl|panTro1|chr5 (50730262-50730428) | |
| 335-483, gnl|rheMac2|chr4 (49565913-49566079) | |
| 335-483, gnl|rn3|chr9 (16982938-16983104) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) |