Ss1.1-rnje10c_l15.5
|
CTCAGGGGCTGAAGTTTGTGAGGTCCAGTATTGAATCCTTTTTGAGCCAACCTCCTTTTC
CTGAAGAATGGCACTGTCTAAGAGGGAGCTGGATGAATTGAAACCATGGATAGAGAAGAC
AGTGAAGAGGGTGCTGGGTTTCTCAGAGCCCACAGTGGTCACAGCAGCACTGAACTGTGT
GGGGAAGGGCATGGACAAGAAGAAGGCAGCTGACCATCTGAAACCTTTTCTTGATGATTC
CACTCTCCGATTTGTGGACAAACTATTTGAGGCTGTGGAGGAAGGCCGAAGCTCTAGGCA
TTCCAAGTCCAGCAGTGACAGGAGCAGAAAACGAGAGCTAAAGGAAGTGTTTGGTGATGA
CTCTGAGATCTCCAAGGAATCATCAGGAGTAAAGAAGCGACGGATACCCCGTTTTGAGGA
AGTGGAAGAGGAGCCAGAAGTGATTCCGGGGCCTCCCTCAAAGAGTCTCAGGCCAAGGAT
GTCATCGAGGAGTACTTCAAATGCAAGAAATAATCAAATAAAAAGACTGGCTCCTAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCAGGGGCTGAAGTTTGTGAGGTCCAGTATTGAATCCTTTTTGAGCCAACCTCCTTTTC
CTGAAGAATGGCACTGTCTAAGAGGGAGCTGGATGAATTGAAACCATGGATAGAGAAGAC
AGTGAAGAGGGTGCTGGGTTTCTCAGAGCCCACAGTGGTCACAGCAGCACTGAACTGTGT
GGGGAAGGGCATGGACAAGAAGAAGGCAGCTGACCATCTGAAACCTTTTCTTGATGATTC
CACTCTCCGATTTGTGGACAAACTATTTGAGGCTGTGGAGGAAGGCCGAAGCTCTAGGCA
TTCCAAGTCCAGCAGTGACAGGAGCAGAAAACGAGAGCTAAAGGAAGTGTTTGGTGATGA
CTCTGAGATCTCCAAGGAATCATCAGGAGTAAAGAAGCGACGGATACCCCGTTTTGAGGA
AGTGGAAGAGGAGCCAGAAGTGATTCCGGGGCCTCCCTCAAAGAGTCTCAGGCCAAGGAT
GTCATCGAGGAGTACTTCAAATGCAAGAAATAATCAAATAAAAAGACTGGCTCCTAAAAA |
|
gi|34858059|ref|XP_342297.1| |
Protein identifier
|
gi|34858059|ref|XP_342297.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
16-212, gnl|bosTau2|chr3 (17144087-17143890) |
|
16-212, gnl|Hg17|chr1 (147110419-147110618) |
|
16-212, gnl|Mm7|chr3 (95727594-95727394) |
| |
|
342-467, gnl|bosTau2|chr3 (17140461-17140336) |
|
342-467, gnl|canFam2|chr17 (62638534-62638437) |
|
342-467, gnl|dasNov1|scaffold_194503 (2374-2471) |
|
342-467, gnl|echTel1|scaffold_293096 (48996-48901) |
|
342-467, gnl|fr1|chrUn (268076723-268076890) |
|
342-467, gnl|galGal2|chrUn (26409297-26409198) |
|
342-467, gnl|Hg17|chr1 (147113850-147113975) |
|
342-467, gnl|hg17|chr8 (68060597-68060692) |
|
342-467, gnl|loxAfr1|scaffold_13317 (395-490) |
|
342-467, gnl|mm7|chr3 (95722867-95722964) |
|
342-467, gnl|Mm7|chr3 (95723013-95722888) |
|
342-467, gnl|monDom2|scaffold_44 (3544144-3544052) |
|
342-467, gnl|panTro1|chr7 (70082213-70082308) |
|
342-467, gnl|rheMac2|chr8 (69610658-69610755) |
|
342-467, gnl|rn3|chr2 (190598497-190598594) |
|
342-467, gnl|tetNig1|chr8 (8769813-8769987) |
|
342-467, gnl|xenTro1|scaffold_1304 (171413-171510) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
16-212, gnl|bosTau2|chr3 (17144087-17143890) |
|
16-212, gnl|Hg17|chr1 (147110419-147110618) |
|
16-212, gnl|Mm7|chr3 (95727594-95727394) |
| |
|
342-467, gnl|bosTau2|chr3 (17140461-17140336) |
|
342-467, gnl|canFam2|chr17 (62638534-62638437) |
|
342-467, gnl|dasNov1|scaffold_194503 (2374-2471) |
|
342-467, gnl|echTel1|scaffold_293096 (48996-48901) |
|
342-467, gnl|fr1|chrUn (268076723-268076890) |
|
342-467, gnl|galGal2|chrUn (26409297-26409198) |
|
342-467, gnl|Hg17|chr1 (147113850-147113975) |
|
342-467, gnl|hg17|chr8 (68060597-68060692) |
|
342-467, gnl|loxAfr1|scaffold_13317 (395-490) |
|
342-467, gnl|mm7|chr3 (95722867-95722964) |
|
342-467, gnl|Mm7|chr3 (95723013-95722888) |
|
342-467, gnl|monDom2|scaffold_44 (3544144-3544052) |
|
342-467, gnl|panTro1|chr7 (70082213-70082308) |
|
342-467, gnl|rheMac2|chr8 (69610658-69610755) |
|
342-467, gnl|rn3|chr2 (190598497-190598594) |
|
342-467, gnl|tetNig1|chr8 (8769813-8769987) |
|
342-467, gnl|xenTro1|scaffold_1304 (171413-171510) |
|
nlu (0.191681) |
|
nje (0.16592) |
|
cty (0.10408) |
|
nlu (0.191681) |
|
nje (0.16592) |
|
cty (0.10408) |
