Non-Coding RNA Search

Ss1.1-rnje16c_e6.5

Sequence:


               
               CCTCGTGCCGCCTCGTGCCGCATGTCGACGGCCATGAACTTGGGGTCCAAGAGCTTCCAG
CCGCGGCCCCCGGACAAGGGCAGCTTCCCGCTGGATCACTTTGGTGAATGTAAAAGCTTT
AAGGAGAAGTTCATGAAGTGTCTCCGTGACAATAACTTTGAAAATGCTTTGTGCAGAAAT
GAATCAAAAGAATATTTAGAATGCAGGATGGAGAGGCAGCTGATGGCACAGGAGCCCCTG
GAAAAACTGGGCTTTGGAGATTTGAAGGACGGAAAGTCTGACCGAGACTGAACCTGGTGA
AAGGCCGCACAGCTGTGGGGGGTCCGGACGACCCCGCCCCCGGCGGCTGGCGTGTCGGTA
CCACGGCTCGGGGTGGGGGGGCTCTGGGGGCGCCCGCCAGATGCCGCTGGAAGTCAGAAC
GGACGCCCCTCCCCGAGGACGCAGCTCGTGGCCGGGCAGGGGCTGGTCTTCGACGCTCCC
GAGGATGTCGGAAACCCGTCGCCCCGCCACAGCCCTGCCGACCCCGCGGCGTTGGGTGCG
TCTGAAGTCGCGGGTGTGACGGGCTCCCGCGGAGGTGGCTGCCATGTGGCGTGCGCCCAG
CGACTGGTCAGCTCGGGCTCCTGGGGACGCTGGTTCGCATCGCGGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCGTGCCGCCTCGTGCCGCATGTCGACGGCCATGAACTTGGGGTCCAAGAGCTTCCAG
CCGCGGCCCCCGGACAAGGGCAGCTTCCCGCTGGATCACTTTGGTGAATGTAAAAGCTTT
AAGGAGAAGTTCATGAAGTGTCTCCGTGACAATAACTTTGAAAATGCTTTGTGCAGAAAT
GAATCAAAAGAATATTTAGAATGCAGGATGGAGAGGCAGCTGATGGCACAGGAGCCCCTG
GAAAAACTGGGCTTTGGAGATTTGAAGGACGGAAAGTCTGACCGAGACTGAACCTGGTGA
AAGGCCGCACAGCTGTGGGGGGTCCGGACGACCCCGCCCCCGGCGGCTGGCGTGTCGGTA
CCACGGCTCGGGGTGGGGGGGCTCTGGGGGCGCCCGCCAGATGCCGCTGGAAGTCAGAAC
GGACGCCCCTCCCCGAGGACGCAGCTCGTGGCCGGGCAGGGGCTGGTCTTCGACGCTCCC
GAGGATGTCGGAAACCCGTCGCCCCGCCACAGCCCTGCCGACCCCGCGGCGTTGGGTGCG
TCTGAAGTCGCGGGTGTGACGGGCTCCCGCGGAGGTGGCTGCCATGTGGCGTGCGCCCAG
CGACTGGTCAGCTCGGGCTCCTGGGGACGCTGGTTCGCATCGCGGTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|37574050|ref|NP_932097.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|37574050|ref|NP_932097.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               21-469, gnl|bosTau2|chr17 (10218237-10218689)
               

               
               21-469, gnl|Hg17|chr5 (18930034-18929559)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-469, gnl|bosTau2|chr17 (10218237-10218689)
               

               
               21-469, gnl|Hg17|chr5 (18930034-18929559)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nje (0.16592)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)
               

               
               med (0.116252)

	21-469, gnl\|bosTau2\|chr17 (10218237-10218689)
	21-469, gnl\|Hg17\|chr5 (18930034-18929559)