Ss1.1-rnje18c_j1.5
|
CTTTGAGCGAGGAAGGAGAGTAGGGTGCGTGGAAGGTCTAGGGGTCTTGAAGAAAAAGAG
GAGGAGGGGAAGTCCCAGAAGCCTGTCCTTCATGTATTGGGGTGCAGGGCGGAATCCCCC
CTTTCTGGGCCGTACCTGACGAGGCAAGGCGGCTGCCACGCAGGAATCGAATCGTGGATT
TACTTTGTGGGGGCATTGCCTTGCGCCCGAGTGTACAAGATTCAGGGTTGAATCCTTGGA
TGAAAGGATTTTAAAGGTTATCTGCACCTTCTGACTGGGAAAAGATGGTCAACGTCTTGA
AAGGAGTGCTTATAGAATGTGACCCAGCCATGAAGCAGTTTCTGCTGTACTTGGATGAGT
CCAATGCCCTAGGGAAGAAGTTCATCATTCAGGACATAGATGACACGCACGTCTTCGTAA
TAGCAGAGTTGGTTAATGTCCTCCAGGAGCGAGTAGGTGAACTGATGGACCAAAATGCCT
TTTCTCTTACCCAGAAGTGAAAATAGTAGATATTGACCACTTAGGAATTAAAAGTAACGA
ATGTGACAGTCTCACCGTTCAATAGCTTATGTAACTGATTAGATTTACAGAATTGCTTGG
AAGCATGCGACAGGCAAGACTGTGGTATCATTTGTTCATAAAAAAGCCCCTGAACTGACT
TTCTTCTGTTTTTTTCAGTACATAGATCCTAAAATTTAAATTAAAAAAAAAAAAAAAAAA
AAAGCCCTAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTTTGAGCGAGGAAGGAGAGTAGGGTGCGTGGAAGGTCTAGGGGTCTTGAAGAAAAAGAG
GAGGAGGGGAAGTCCCAGAAGCCTGTCCTTCATGTATTGGGGTGCAGGGCGGAATCCCCC
CTTTCTGGGCCGTACCTGACGAGGCAAGGCGGCTGCCACGCAGGAATCGAATCGTGGATT
TACTTTGTGGGGGCATTGCCTTGCGCCCGAGTGTACAAGATTCAGGGTTGAATCCTTGGA
TGAAAGGATTTTAAAGGTTATCTGCACCTTCTGACTGGGAAAAGATGGTCAACGTCTTGA
AAGGAGTGCTTATAGAATGTGACCCAGCCATGAAGCAGTTTCTGCTGTACTTGGATGAGT
CCAATGCCCTAGGGAAGAAGTTCATCATTCAGGACATAGATGACACGCACGTCTTCGTAA
TAGCAGAGTTGGTTAATGTCCTCCAGGAGCGAGTAGGTGAACTGATGGACCAAAATGCCT
TTTCTCTTACCCAGAAGTGAAAATAGTAGATATTGACCACTTAGGAATTAAAAGTAACGA
ATGTGACAGTCTCACCGTTCAATAGCTTATGTAACTGATTAGATTTACAGAATTGCTTGG
AAGCATGCGACAGGCAAGACTGTGGTATCATTTGTTCATAAAAAAGCCCCTGAACTGACT
TTCTTCTGTTTTTTTCAGTACATAGATCCTAAAATTTAAATTAAAAAAAAAAAAAAAAAA
AAAGCCCTAAAA
|
|
gi|55665883|emb|CAH70241.1| |
Protein identifier
|
gi|55665883|emb|CAH70241.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
245-439, gnl|bosTau2|chr26 (34495022-34495212) |
|
245-439, gnl|canFam2|chr28 (40374022-40374200) |
|
245-439, gnl|echTel1|scaffold_300399 (4688-4499) |
|
245-439, gnl|hg17|chr10 (130330810-130330984) |
|
245-439, gnl|loxAfr1|scaffold_9849 (55564-55767) |
|
245-439, gnl|mm7|chr7 (132566107-132566260) |
|
245-439, gnl|panTro1|chr8 (132996043-132996218) |
|
245-439, gnl|rn3|chr1 (195998155-195998310) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
245-439, gnl|bosTau2|chr26 (34495022-34495212) |
|
245-439, gnl|canFam2|chr28 (40374022-40374200) |
|
245-439, gnl|echTel1|scaffold_300399 (4688-4499) |
|
245-439, gnl|hg17|chr10 (130330810-130330984) |
|
245-439, gnl|loxAfr1|scaffold_9849 (55564-55767) |
|
245-439, gnl|mm7|chr7 (132566107-132566260) |
|
245-439, gnl|panTro1|chr8 (132996043-132996218) |
|
245-439, gnl|rn3|chr1 (195998155-195998310) |
|
vin (0.997672) |
|
spc (0.793561) |
|
mgp (0.461361) |
|
bfe (0.449573) |
|
hea (0.408998) |
|
ssp (0.406559) |
|
sag (0.36543) |
|
fty (0.351679) |
|
fhi (0.339155) |
|
nje (0.33184) |
|
isp (0.300752) |
|
lyg (0.266205) |
|
ova (0.258264) |
|
ret (0.257467) |
|
jca (0.22792) |
|
aor (0.195274) |
|
gul (0.177588) |
|
fbs (0.175346) |
|
rec (0.17307) |
|
eye (0.170503) |
|
fco (0.157208) |
|
cli (0.152812) |
|
ski (0.146735) |
|
csk (0.140746) |
|
nca (0.136874) |
|
pla (0.133672) |
|
ute (0.132784) |
|
cov (0.132153) |
|
kid (0.129735) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
eje (0.0988338) |
|
vin (0.997672) |
|
spc (0.793561) |
|
mgp (0.461361) |
|
bfe (0.449573) |
|
hea (0.408998) |
|
ssp (0.406559) |
|
sag (0.36543) |
|
fty (0.351679) |
|
fhi (0.339155) |
|
nje (0.33184) |
|
isp (0.300752) |
|
lyg (0.266205) |
|
ova (0.258264) |
|
ret (0.257467) |
|
jca (0.22792) |
|
aor (0.195274) |
|
gul (0.177588) |
|
fbs (0.175346) |
|
rec (0.17307) |
|
eye (0.170503) |
|
fco (0.157208) |
|
cli (0.152812) |
|
ski (0.146735) |
|
csk (0.140746) |
|
nca (0.136874) |
|
pla (0.133672) |
|
ute (0.132784) |
|
cov (0.132153) |
|
kid (0.129735) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
eje (0.0988338) |
