Ss1.1-rnje19c_f3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAAAACAATACTTCTACTTTGCTTAAAAACAGCACTAACAACACTCCGAAAAAAGGAAAA TAGCACAAAATGTGCAGTGGAGTAACACATCATGAAGGGAAGGAAAGGTGTCCAACAATA GCGACGGTAAAACTTGTCTGTAAGGACTGTTGGTTTTGATTAGCACCTTTTCTGTACGTT TAAATCATTATCCACATATTTTAAGTACTGAAATTGCAACTGCAGCTTCTGAGTGAAAGT TCATTTTCAGCCTCTTAAGCTTTTAAAGTCCTCTAAATCACCTGTTATTAAACTTGTTAC CTAGAAACTGAATGAAAAATACCTGAGCAGTGGCTCCGTCATTATTGGGTATAGAGGAGT TCTTGTTTTTCCATCAACTTCTCATTTTTCTCAAACTGTATATTTTCTCCGCCCCGCCGC CAAAACCACCCCCGGTCGGAGCGGAGTTCCGACAGCCCCTCAGATTCACCTTCTGCTCCG CTTCGAAGGGAGACCGCGGCGTCTCCGGGCCCGACTCGCCAGAGGGAGGGGCGACGGGTC GGGCAAGCGAAGAGTTAACGGAGGCAGAGCGGAGGATCGCGGAGCTGCACGCTGCAGCCT GCGCGGCCGGCCAGCTGAACTACGTGGACCCAGCTACCGGCTACGTGGTGCTCACACAGC TGGCCCACGTGCAGCGAGGCCACTGCTGCGGTTCTGCCTGCAGACACTGTCCGTATGGCC AAGTCAGTGTTAAAGATCCATCCAAAAAGAAGCAATTCAATTCGTATTTTTATGTTTGAC CACAGTTTCATCTCTGTTCTCCCTCTAATTGAGTCTTATTTAAAAAAAATAAAACCGTAA TCCAGAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAAAACAATACTTCTACTTTGCTTAAAAACAGCACTAACAACACTCCGAAAAAAGGAAAA TAGCACAAAATGTGCAGTGGAGTAACACATCATGAAGGGAAGGAAAGGTGTCCAACAATA GCGACGGTAAAACTTGTCTGTAAGGACTGTTGGTTTTGATTAGCACCTTTTCTGTACGTT TAAATCATTATCCACATATTTTAAGTACTGAAATTGCAACTGCAGCTTCTGAGTGAAAGT TCATTTTCAGCCTCTTAAGCTTTTAAAGTCCTCTAAATCACCTGTTATTAAACTTGTTAC CTAGAAACTGAATGAAAAATACCTGAGCAGTGGCTCCGTCATTATTGGGTATAGAGGAGT TCTTGTTTTTCCATCAACTTCTCATTTTTCTCAAACTGTATATTTTCTCCGCCCCGCCGC CAAAACCACCCCCGGTCGGAGCGGAGTTCCGACAGCCCCTCAGATTCACCTTCTGCTCCG CTTCGAAGGGAGACCGCGGCGTCTCCGGGCCCGACTCGCCAGAGGGAGGGGCGACGGGTC GGGCAAGCGAAGAGTTAACGGAGGCAGAGCGGAGGATCGCGGAGCTGCACGCTGCAGCCT GCGCGGCCGGCCAGCTGAACTACGTGGACCCAGCTACCGGCTACGTGGTGCTCACACAGC TGGCCCACGTGCAGCGAGGCCACTGCTGCGGTTCTGCCTGCAGACACTGTCCGTATGGCC AAGTCAGTGTTAAAGATCCATCCAAAAAGAAGCAATTCAATTCGTATTTTTATGTTTGAC CACAGTTTCATCTCTGTTCTCCCTCTAATTGAGTCTTATTTAAAAAAAATAAAACCGTAA TCCAGAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-410, gnl|bosTau2|chr16 (56938894-56939300) | |
| 1-410, gnl|Hg17|chr1 (194605984-194606388) | |
| 1-410, gnl|Mm7|chr1 (138734424-138734013) | |
| 705-833, gnl|bosTau2|chr16 (56940875-56941003) | |
| 705-833, gnl|canFam2|chr7 (7863124-7863038) | |
| 705-833, gnl|danRer3|chr22 (17417378-17417464) | |
| 705-833, gnl|dasNov1|scaffold_23355 (10484-10401) | |
| 705-833, gnl|echTel1|scaffold_263101 (9753-9667) | |
| 705-833, gnl|fr1|chrUn (140829945-140829871) | |
| 705-833, gnl|galGal2|chr8 (2253102-2253016) | |
| 705-833, gnl|hg17|chr1 (194607928-194608014) | |
| 705-833, gnl|Hg17|chr1 (194607933-194608055) | |
| 705-833, gnl|loxAfr1|scaffold_143485 (629-543) | |
| 705-833, gnl|mm7|chr1 (138732325-138732239) | |
| 705-833, gnl|Mm7|chr1 (138732318-138732196) | |
| 705-833, gnl|monDom2|scaffold_16 (57513110-57513196) | |
| 705-833, gnl|oryCun1|scaffold_204331 (49449-49363) | |
| 705-833, gnl|panTro1|chr1 (177257403-177257489) | |
| 705-833, gnl|rheMac2|chr1 (172594519-172594433) | |
| 705-833, gnl|rn3|chr13 (52179276-52179190) | |
| 705-833, gnl|tetNig1|chr1 (15071127-15071051) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-410, gnl|bosTau2|chr16 (56938894-56939300) | |
| 1-410, gnl|Hg17|chr1 (194605984-194606388) | |
| 1-410, gnl|Mm7|chr1 (138734424-138734013) | |
| 705-833, gnl|bosTau2|chr16 (56940875-56941003) | |
| 705-833, gnl|canFam2|chr7 (7863124-7863038) | |
| 705-833, gnl|danRer3|chr22 (17417378-17417464) | |
| 705-833, gnl|dasNov1|scaffold_23355 (10484-10401) | |
| 705-833, gnl|echTel1|scaffold_263101 (9753-9667) | |
| 705-833, gnl|fr1|chrUn (140829945-140829871) | |
| 705-833, gnl|galGal2|chr8 (2253102-2253016) | |
| 705-833, gnl|hg17|chr1 (194607928-194608014) | |
| 705-833, gnl|Hg17|chr1 (194607933-194608055) | |
| 705-833, gnl|loxAfr1|scaffold_143485 (629-543) | |
| 705-833, gnl|mm7|chr1 (138732325-138732239) | |
| 705-833, gnl|Mm7|chr1 (138732318-138732196) | |
| 705-833, gnl|monDom2|scaffold_16 (57513110-57513196) | |
| 705-833, gnl|oryCun1|scaffold_204331 (49449-49363) | |
| 705-833, gnl|panTro1|chr1 (177257403-177257489) | |
| 705-833, gnl|rheMac2|chr1 (172594519-172594433) | |
| 705-833, gnl|rn3|chr13 (52179276-52179190) | |
| 705-833, gnl|tetNig1|chr1 (15071127-15071051) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| duo (0.345602) | |
| nje (0.33184) | |
| jej (0.197844) | |
| fty (0.17584) | |
| pla (0.133672) | |
| eje (0.0988338) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| duo (0.345602) | |
| nje (0.33184) | |
| jej (0.197844) | |
| fty (0.17584) | |
| pla (0.133672) | |
| eje (0.0988338) |