Non-Coding RNA Search

Ss1.1-rnje23c_j3.5

Sequence:


               
               CGGGCAGGCGGCTGTGTGCGGGAGCGCGATGTATTTCTGCTGGAGCGGGGACCGCCCCAG
GTCGCAGAACCCGGGGCCGGCGGGCCCGGGAGGCGACGCGCTGCTGCAGGCGGCCAGCGG
GGAGCGGCACTCTCTGCTGCTGCTGAGCAACGGCGCGGTCCAGTCGTGCGGGGACAACAG
CCACGGCCAGCTGGGCCGGAAGGGCGTGCAGCGCGGGGAGCGACCAGAGCGAATTCCAGC
CTTGAAAACTCTTCCAGTTCGTCTGGTGAGCTGCGGCAAAGAGCACTCCCTGGCTGTCTG
CCACAGAGGAAGGGTCTTTGCGTGGGGAGCTGGTTCTGAAGGACAGCTGGGAACTGGAGA
CTTTAAGGAAGTAAATTTTATACCTAAGAAGATAACTCTGACTGATATAAAAATTATACA
AGTTTCCTGCGGACACTACCACTCCCTGGCATTATCAGAAGATGGCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCAGGCGGCTGTGTGCGGGAGCGCGATGTATTTCTGCTGGAGCGGGGACCGCCCCAG
GTCGCAGAACCCGGGGCCGGCGGGCCCGGGAGGCGACGCGCTGCTGCAGGCGGCCAGCGG
GGAGCGGCACTCTCTGCTGCTGCTGAGCAACGGCGCGGTCCAGTCGTGCGGGGACAACAG
CCACGGCCAGCTGGGCCGGAAGGGCGTGCAGCGCGGGGAGCGACCAGAGCGAATTCCAGC
CTTGAAAACTCTTCCAGTTCGTCTGGTGAGCTGCGGCAAAGAGCACTCCCTGGCTGTCTG
CCACAGAGGAAGGGTCTTTGCGTGGGGAGCTGGTTCTGAAGGACAGCTGGGAACTGGAGA
CTTTAAGGAAGTAAATTTTATACCTAAGAAGATAACTCTGACTGATATAAAAATTATACA
AGTTTCCTGCGGACACTACCACTCCCTGGCATTATCAGAAGATGGCCA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61847404|ref|XP_591235.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61847404|ref|XP_591235.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-227, gnl|bosTau2|chr6 (19215651-19215878)
               

               
               1-227, gnl|Hg17|chr4 (89657223-89657450)
               

               
               1-227, gnl|Mm7|chr6 (57544580-57544798)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-227, gnl|bosTau2|chr6 (19215651-19215878)
               

               
               1-227, gnl|Hg17|chr4 (89657223-89657450)
               

               
               1-227, gnl|Mm7|chr6 (57544580-57544798)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               nje (0.16592)
               

               
               jca (0.11396)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)
               

               
               jca (0.11396)

	1-227, gnl\|bosTau2\|chr6 (19215651-19215878)
	1-227, gnl\|Hg17\|chr4 (89657223-89657450)
	1-227, gnl\|Mm7\|chr6 (57544580-57544798)