Ss1.1-rnje24c_c11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGGAATTCGGACGAGGGCTACCGCCGCCGCCGCAGCCGTTGCGACGGTCTCAGCCGAGT TCAGAGGGCCAGGAGGTGGGAGACTTCCCACACGGTGGCTGAGATGTCGTCCTCCGCGGC TTTTTATCTTCTCTCTACCCTGGTGAGGGTACTTGGTCACCTCCTTCTTGTTGCTCAAAT ACCCGACCTTGCTGCACCAGAGAAAGAAGCAGCGATTCCTCAGTAAACACATCTCTCACC GCGGAGGTGCTGGGGAAAATTTGGAGAATACAATGGCAGCCTTTCAGCATGCAGTTACAA TTGGAACTGATATGTTGGAACTGGACTGCCACATCACAAAAGACGAACAAGTTGTAGTGT CACACGATGAGAATCTAAAGAGATCAACTGGGGTCAATGTAAACATCTCCGATCTCAAGT ACTGTGAACTCCCACCTTACCTTGGCAAACTGGATGTCTCATTTCAAAAAGCATGCCAAT GCGAAGGAAAAGACAACCGAATTCCATTACTGAAGGAAGTTTTTGAGGCCTTTCCTAACA CTCCCATTAACATCGATATCAAAGTCAACAACAATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGGAATTCGGACGAGGGCTACCGCCGCCGCCGCAGCCGTTGCGACGGTCTCAGCCGAGT TCAGAGGGCCAGGAGGTGGGAGACTTCCCACACGGTGGCTGAGATGTCGTCCTCCGCGGC TTTTTATCTTCTCTCTACCCTGGTGAGGGTACTTGGTCACCTCCTTCTTGTTGCTCAAAT ACCCGACCTTGCTGCACCAGAGAAAGAAGCAGCGATTCCTCAGTAAACACATCTCTCACC GCGGAGGTGCTGGGGAAAATTTGGAGAATACAATGGCAGCCTTTCAGCATGCAGTTACAA TTGGAACTGATATGTTGGAACTGGACTGCCACATCACAAAAGACGAACAAGTTGTAGTGT CACACGATGAGAATCTAAAGAGATCAACTGGGGTCAATGTAAACATCTCCGATCTCAAGT ACTGTGAACTCCCACCTTACCTTGGCAAACTGGATGTCTCATTTCAAAAAGCATGCCAAT GCGAAGGAAAAGACAACCGAATTCCATTACTGAAGGAAGTTTTTGAGGCCTTTCCTAACA CTCCCATTAACATCGATATCAAAGTCAACAACAATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 22-129, gnl|bosTau2|chr19 (4523439-4523547) | |
| 22-129, gnl|Hg17|chr17 (54652680-54652778) | |
| 22-129, gnl|Mm7|chr11 (87143948-87143860) | |
| 283-426, gnl|bosTau2|chr19 (4553856-4553997) | |
| 283-426, gnl|canFam2|chr9 (37126316-37126482) | |
| 283-426, gnl|danRer3|chr15 (13519777-13519934) | |
| 283-426, gnl|dasNov1|scaffold_13222 (6141-6306) | |
| 283-426, gnl|echTel1|scaffold_289112 (3764-3921) | |
| 283-426, gnl|fr1|chrUn (14739646-14739484) | |
| 283-426, gnl|galGal2|chr19 (6779802-6779957) | |
| 283-426, gnl|hg17|chr17 (54677543-54677709) | |
| 283-426, gnl|Hg17|chr17 (54677552-54677693) | |
| 283-426, gnl|loxAfr1|scaffold_12098 (34011-34177) | |
| 283-426, gnl|mm7|chr11 (87129484-87129324) | |
| 283-426, gnl|Mm7|chr11 (87129473-87129332) | |
| 283-426, gnl|monDom2|scaffold_56 (3444250-3444084) | |
| 283-426, gnl|oryCun1|scaffold_191615 (3668-3503) | |
| 283-426, gnl|panTro1|chr19_random (40423393-40423559) | |
| 283-426, gnl|rn3|chr10 (75341683-75341523) | |
| 283-426, gnl|tetNig1|chrUn_random (14644652-14644508) | |
| 283-426, gnl|xenTro1|scaffold_100 (879100-879263) | |
| 470-576, gnl|bosTau2|chr19 (4561732-4561838) | |
| 470-576, gnl|canFam2|chr9 (37135877-37136009) | |
| 470-576, gnl|danRer3|chr15 (13520566-13520688) | |
| 470-576, gnl|fr1|chrUn (14738942-14738833) | |
| 470-576, gnl|galGal2|chr19 (6781071-6781203) | |
| 470-576, gnl|hg17|chr17 (54689254-54689386) | |
| 470-576, gnl|Hg17|chr17 (54689263-54689369) | |
| 470-576, gnl|loxAfr1|scaffold_12098 (38414-38533) | |
| 470-576, gnl|mm7|chr11 (87115795-87115663) | |
| 470-576, gnl|Mm7|chr11 (87115784-87115678) | |
| 470-576, gnl|monDom2|scaffold_56 (3431871-3431739) | |
| 470-576, gnl|oryCun1|scaffold_970 (141-273) | |
| 470-576, gnl|panTro1|chr19_random (40435054-40435186) | |
| 470-576, gnl|rheMac2|chr16 (43504442-43504574) | |
| 470-576, gnl|rn3|chr10 (75326688-75326556) | |
| 470-576, gnl|tetNig1|chrUn_random (14643867-14643758) | |
| 470-576, gnl|xenTro1|scaffold_100 (889034-889167) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 22-129, gnl|bosTau2|chr19 (4523439-4523547) | |
| 22-129, gnl|Hg17|chr17 (54652680-54652778) | |
| 22-129, gnl|Mm7|chr11 (87143948-87143860) | |
| 283-426, gnl|bosTau2|chr19 (4553856-4553997) | |
| 283-426, gnl|canFam2|chr9 (37126316-37126482) | |
| 283-426, gnl|danRer3|chr15 (13519777-13519934) | |
| 283-426, gnl|dasNov1|scaffold_13222 (6141-6306) | |
| 283-426, gnl|echTel1|scaffold_289112 (3764-3921) | |
| 283-426, gnl|fr1|chrUn (14739646-14739484) | |
| 283-426, gnl|galGal2|chr19 (6779802-6779957) | |
| 283-426, gnl|hg17|chr17 (54677543-54677709) | |
| 283-426, gnl|Hg17|chr17 (54677552-54677693) | |
| 283-426, gnl|loxAfr1|scaffold_12098 (34011-34177) | |
| 283-426, gnl|mm7|chr11 (87129484-87129324) | |
| 283-426, gnl|Mm7|chr11 (87129473-87129332) | |
| 283-426, gnl|monDom2|scaffold_56 (3444250-3444084) | |
| 283-426, gnl|oryCun1|scaffold_191615 (3668-3503) | |
| 283-426, gnl|panTro1|chr19_random (40423393-40423559) | |
| 283-426, gnl|rn3|chr10 (75341683-75341523) | |
| 283-426, gnl|tetNig1|chrUn_random (14644652-14644508) | |
| 283-426, gnl|xenTro1|scaffold_100 (879100-879263) | |
| 470-576, gnl|bosTau2|chr19 (4561732-4561838) | |
| 470-576, gnl|canFam2|chr9 (37135877-37136009) | |
| 470-576, gnl|danRer3|chr15 (13520566-13520688) | |
| 470-576, gnl|fr1|chrUn (14738942-14738833) | |
| 470-576, gnl|galGal2|chr19 (6781071-6781203) | |
| 470-576, gnl|hg17|chr17 (54689254-54689386) | |
| 470-576, gnl|Hg17|chr17 (54689263-54689369) | |
| 470-576, gnl|loxAfr1|scaffold_12098 (38414-38533) | |
| 470-576, gnl|mm7|chr11 (87115795-87115663) | |
| 470-576, gnl|Mm7|chr11 (87115784-87115678) | |
| 470-576, gnl|monDom2|scaffold_56 (3431871-3431739) | |
| 470-576, gnl|oryCun1|scaffold_970 (141-273) | |
| 470-576, gnl|panTro1|chr19_random (40435054-40435186) | |
| 470-576, gnl|rheMac2|chr16 (43504442-43504574) | |
| 470-576, gnl|rn3|chr10 (75326688-75326556) | |
| 470-576, gnl|tetNig1|chrUn_random (14643867-14643758) | |
| 470-576, gnl|xenTro1|scaffold_100 (889034-889167) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| sin (0.174948) | |
| nje (0.16592) | |
| cty (0.10408) | |
| eje (0.0988338) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sin (0.174948) | |
| nje (0.16592) | |
| cty (0.10408) | |
| eje (0.0988338) |