Non-Coding RNA Search

Ss1.1-rnje24c_n13.5

Sequence:


               
               AGCCCAATATGAAGATTTGATACCAAAGAAGCAGAAGCTTCATTTTCTCCTTAGCCTCCA
AACAAATAACTTCACCACTTAGACTAAAACTGGGCAGTTTGTGGTTCTGGCCTTTTGTTT
TTTAAGCTTTCTGTCCTGTATTTTTTACAAGGAAGT------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------GGTCCGTGGCTACAGCTCCAGTTGGACCCCCAGCCT
GGAAATGTACATATGCCGCGGGTGTGGCCCTAAAAGACAAAAAAAACAAATTAATGATTT
TTATGTAAAAAGTATTTCCTGAAGGTAAAATTAGGATGGTCGTTAGACTTGCCGTTCTCC
TTTCCTTCCCATCTCTCTCTTGGTCTTCATGGACGAGACAAGTGAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCCCAATATGAAGATTTGATACCAAAGAAGCAGAAGCTTCATTTTCTCCTTAGCCTCCA
AACAAATAACTTCACCACTTAGACTAAAACTGGGCAGTTTGTGGTTCTGGCCTTTTGTTT
TTTAAGCTTTCTGTCCTGTATTTTTTACAAGGAAGT------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------GGTCCGTGGCTACAGCTCCAGTTGGACCCCCAGCCT
GGAAATGTACATATGCCGCGGGTGTGGCCCTAAAAGACAAAAAAAACAAATTAATGATTT
TTATGTAAAAAGTATTTCCTGAAGGTAAAATTAGGATGGTCGTTAGACTTGCCGTTCTCC
TTTCCTTCCCATCTCTCTCTTGGTCTTCATGGACGAGACAAGTGAGAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-156, gnl|bosTau2|chr6 (21724723-21724565)
               

               
               1-156, gnl|Hg17|chr4 (24956214-24956349)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-156, gnl|bosTau2|chr6 (21724723-21724565)
               

               
               1-156, gnl|Hg17|chr4 (24956214-24956349)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nje (0.16592)
               

               
               liv (0.146284)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)
               

               
               liv (0.146284)

	1-156, gnl\|bosTau2\|chr6 (21724723-21724565)
	1-156, gnl\|Hg17\|chr4 (24956214-24956349)