Ss1.1-rnje26c_l12.5
|
ACTGTATGTTTAAGGAAAGACATAACAAGAAAAAAAATTAAAATGGAATTGGAGGCCGAA
TGCCACACAACTGCCCTCTCTCTCACCCAGTAAATGCAGAAAGCTCTTAGGACAGACAGG
AAAACCTGCCACGGGGCTGCTTCCCTTCCTCCCAAGGATGGCAAAGGCTCAGGCTCCACA
TCGGCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGCAGC
AAATGTCTATGGGAAGGGCTGGGGGAAGGGGCACCCAGCTGCCTTTCTTCCCCCTCCCTG
AAGCCACCACCAGTCACCTCAGTGGAAGCAATCAGAGGTGTTGGCCAAGGAGAAAGAGGA
AGATGAAAGCGAACTCTCCATAGAATGTAATTTATAGATGCGTGTATATGTATATATCTA
TTTATATGTAAATAGCATATATAAAGAGATATATATATATATAGCCTACTTTTTAAACTA
TGCAGGGATTTGGTTAAGTTGTTCAGTTAATTTCTTCCCTGTTTTAGAAAACAGCTTGGG
GAAGGTAGCCTGGTCCTTCAAAGGCTAGACATTAGCCATAGCTGACAGCATAAGGAAAGT
CGGGTCCTAGCTTTTAACAGTCCCCTCAACCCCAGCCTGGTTTTGATGGCAGCAGCAATC
ATGACAGTATAAATCTGTGGAAAACTTGGAAGGTTGCCAGGTTTATGGTTAAGCTGGGGG
CGGGGGCAGGGTGTGGAGCAGGCTGCAGGGGGAGAAATTCCTCCTAAGGCCAGGCGCCAG
GTTAGTATGGAGTCACAGTGGAGGCCCCAAACGGCCTGTAGGGATGAGACCACCCCCCTA
CACCCCACCCCGCCAAGCTCTGGCCAGCTCAGGTGGGCGCTTTGCCTG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ACTGTATGTTTAAGGAAAGACATAACAAGAAAAAAAATTAAAATGGAATTGGAGGCCGAA
TGCCACACAACTGCCCTCTCTCTCACCCAGTAAATGCAGAAAGCTCTTAGGACAGACAGG
AAAACCTGCCACGGGGCTGCTTCCCTTCCTCCCAAGGATGGCAAAGGCTCAGGCTCCACA
TCGGCTCTCTCCTAGGATACAGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGCAGC
AAATGTCTATGGGAAGGGCTGGGGGAAGGGGCACCCAGCTGCCTTTCTTCCCCCTCCCTG
AAGCCACCACCAGTCACCTCAGTGGAAGCAATCAGAGGTGTTGGCCAAGGAGAAAGAGGA
AGATGAAAGCGAACTCTCCATAGAATGTAATTTATAGATGCGTGTATATGTATATATCTA
TTTATATGTAAATAGCATATATAAAGAGATATATATATATATAGCCTACTTTTTAAACTA
TGCAGGGATTTGGTTAAGTTGTTCAGTTAATTTCTTCCCTGTTTTAGAAAACAGCTTGGG
GAAGGTAGCCTGGTCCTTCAAAGGCTAGACATTAGCCATAGCTGACAGCATAAGGAAAGT
CGGGTCCTAGCTTTTAACAGTCCCCTCAACCCCAGCCTGGTTTTGATGGCAGCAGCAATC
ATGACAGTATAAATCTGTGGAAAACTTGGAAGGTTGCCAGGTTTATGGTTAAGCTGGGGG
CGGGGGCAGGGTGTGGAGCAGGCTGCAGGGGGAGAAATTCCTCCTAAGGCCAGGCGCCAG
GTTAGTATGGAGTCACAGTGGAGGCCCCAAACGGCCTGTAGGGATGAGACCACCCCCCTA
CACCCCACCCCGCCAAGCTCTGGCCAGCTCAGGTGGGCGCTTTGCCTG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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271-387, - strand, RNAmicro p=0.999594 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
271-387, - strand, RNAmicro p=0.999594 |
Human gene identifier and UTR site,
human gene reading direction
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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nje (0.16592) |
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cty (0.10408) |
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nje (0.16592) |
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cty (0.10408) |