Ss1.1-rnje35c_i9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGCGCCCACCCAACCAAGACGGGCAATGAGCTGATGGAGATCCTGGACGAGATGGACCA GAGCCACCGCAAAGAGATGCAGCTCTACAATAGCATCTTCAGCCTGCTCAGCTTCGAGAA GATCGGCTACACAGGCGGCTACTGCAGTGGCCATGGGCTTCCTGAGGCCAGCGAGAAGAT GGTCAGGGCCAGGGTGCCCGACTCAGACTGCAGAGCTGGGAGCTAATGCCCAGGGATGGG CAGGCTGGACTACACCAGGCCCGCTGGATCTCCCGGGCTCTCCTGGCACCGCCACTGCCT TTGGACACGCTGGGGAGCAGGAGTCAGGCCCGACACAGACAGCAAGAAGCACCTGCTGTC GCTGGAGCTGCTGAGGGTGCTCTGCCCTCCCCTGCCCACGCCAGGCAGCTGGCTCAGAGC GTCAAGGGCAGTCACAGGCGTCCAGTCAGACTGTGCCGTCCAGCCCTGGGCCTGGCTAGG TGAGGGCCTGTGGAGGCTCAGGAGGCCGAGGGCCCGGGGCCTCAGCAGCAGGCCACGTCC CCGGTTAGTCATAGCCTGGTGGGCACCGTGTCACAAATAGGCCGGGCCTCGAGGGTCCGG GTGGGCCGAGGCATCATGACTGCGGTGGCGGCTGGGCAGGGCAGACTGGCCACCTCCACG GAGGGACTCGCTGGCCACGGGCCATGGGCTGTGCCGAGAGGACTGTGTGATGGTGGCAGT CGCCCGCTGACCAATGGGCCCTGTGGCCGGCTGGCAGAGCCCAGCACCGGGCCGCACGCT GGTGCTCCGCCTCACAGCCCAGCGTAGGTGCGGGTGCCACATGCCAGCCCGCCCGCCGGC TTTCCTGGCAGCTCTGTATCAGAACCAATAAAGTGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGCGCCCACCCAACCAAGACGGGCAATGAGCTGATGGAGATCCTGGACGAGATGGACCA GAGCCACCGCAAAGAGATGCAGCTCTACAATAGCATCTTCAGCCTGCTCAGCTTCGAGAA GATCGGCTACACAGGCGGCTACTGCAGTGGCCATGGGCTTCCTGAGGCCAGCGAGAAGAT GGTCAGGGCCAGGGTGCCCGACTCAGACTGCAGAGCTGGGAGCTAATGCCCAGGGATGGG CAGGCTGGACTACACCAGGCCCGCTGGATCTCCCGGGCTCTCCTGGCACCGCCACTGCCT TTGGACACGCTGGGGAGCAGGAGTCAGGCCCGACACAGACAGCAAGAAGCACCTGCTGTC GCTGGAGCTGCTGAGGGTGCTCTGCCCTCCCCTGCCCACGCCAGGCAGCTGGCTCAGAGC GTCAAGGGCAGTCACAGGCGTCCAGTCAGACTGTGCCGTCCAGCCCTGGGCCTGGCTAGG TGAGGGCCTGTGGAGGCTCAGGAGGCCGAGGGCCCGGGGCCTCAGCAGCAGGCCACGTCC CCGGTTAGTCATAGCCTGGTGGGCACCGTGTCACAAATAGGCCGGGCCTCGAGGGTCCGG GTGGGCCGAGGCATCATGACTGCGGTGGCGGCTGGGCAGGGCAGACTGGCCACCTCCACG GAGGGACTCGCTGGCCACGGGCCATGGGCTGTGCCGAGAGGACTGTGTGATGGTGGCAGT CGCCCGCTGACCAATGGGCCCTGTGGCCGGCTGGCAGAGCCCAGCACCGGGCCGCACGCT GGTGCTCCGCCTCACAGCCCAGCGTAGGTGCGGGTGCCACATGCCAGCCCGCCCGCCGGC TTTCCTGGCAGCTCTGTATCAGAACCAATAAAGTGC |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-135, gnl|bosTau2|chr14 (3308981-3309115) | |
| 1-135, gnl|canFam2|chr13 (40892623-40892867) | |
| 1-135, gnl|danRer3|chrUn (91753007-91753244) | |
| 1-135, gnl|dasNov1|scaffold_136079 (3222-3446) | |
| 1-135, gnl|echTel1|scaffold_57527 (1697-1471) | |
| 1-135, gnl|fr1|chrUn (181380217-181379998) | |
| 1-135, gnl|hg17|chr8 (145648547-145648789) | |
| 1-135, gnl|Hg17|chr8 (145648683-145648549) | |
| 1-135, gnl|loxAfr1|scaffold_120436 (1362-1119) | |
| 1-135, gnl|mm7|chr15 (76730648-76730890) | |
| 1-135, gnl|Mm7|chr15 (76730784-76730650) | |
| 1-135, gnl|monDom2|scaffold_79 (3317847-3318083) | |
| 1-135, gnl|oryCun1|scaffold_199595 (38414-38175) | |
| 1-135, gnl|panTro1|chr7 (148904477-148904719) | |
| 1-135, gnl|rheMac2|chr8 (147114757-147114999) | |
| 1-135, gnl|rn3|chr7 (114731495-114731735) | |
| 1-135, gnl|tetNig1|chr21 (1226858-1226639) | |
| 1-135, gnl|xenTro1|scaffold_5033 (818-600) | |
| 191-876, gnl|bosTau2|chr14 (3309582-3310251) | |
| 191-876, gnl|Hg17|chr8 (145648043-145647330) | |
| 191-876, gnl|Mm7|chr15 (76730173-76729498) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-135, gnl|bosTau2|chr14 (3308981-3309115) | |
| 1-135, gnl|canFam2|chr13 (40892623-40892867) | |
| 1-135, gnl|danRer3|chrUn (91753007-91753244) | |
| 1-135, gnl|dasNov1|scaffold_136079 (3222-3446) | |
| 1-135, gnl|echTel1|scaffold_57527 (1697-1471) | |
| 1-135, gnl|fr1|chrUn (181380217-181379998) | |
| 1-135, gnl|hg17|chr8 (145648547-145648789) | |
| 1-135, gnl|Hg17|chr8 (145648683-145648549) | |
| 1-135, gnl|loxAfr1|scaffold_120436 (1362-1119) | |
| 1-135, gnl|mm7|chr15 (76730648-76730890) | |
| 1-135, gnl|Mm7|chr15 (76730784-76730650) | |
| 1-135, gnl|monDom2|scaffold_79 (3317847-3318083) | |
| 1-135, gnl|oryCun1|scaffold_199595 (38414-38175) | |
| 1-135, gnl|panTro1|chr7 (148904477-148904719) | |
| 1-135, gnl|rheMac2|chr8 (147114757-147114999) | |
| 1-135, gnl|rn3|chr7 (114731495-114731735) | |
| 1-135, gnl|tetNig1|chr21 (1226858-1226639) | |
| 1-135, gnl|xenTro1|scaffold_5033 (818-600) | |
| 191-876, gnl|bosTau2|chr14 (3309582-3310251) | |
| 191-876, gnl|Hg17|chr8 (145648043-145647330) | |
| 191-876, gnl|Mm7|chr15 (76730173-76729498) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| nlu (0.383362) | |
| cga (0.279096) | |
| nje (0.16592) | |
| pty (0.142714) | |
| nbm (0.0993246) | |
| eje (0.0988338) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.383362) | |
| cga (0.279096) | |
| nje (0.16592) | |
| pty (0.142714) | |
| nbm (0.0993246) | |
| eje (0.0988338) |