Non-Coding RNA Search

Ss1.1-rnlu1812b_h11.5

Sequence:


               
               CTACTTTGCCTCCAATGGTTTCTCCTTCGGCTCCTCCCATCAGAACTGGGAAAGCTGTGA
AGAACTTTTGTGATGCCAACAACCTCATGTTTATCCCCAGCGTGGGGCCTGGCTACATTG
ACACCAGCATCCGGCCCTGGAACAACCACAATACGCGGAACAGGGTCAATGGCAAGTACT
ATGAGACGGCCCTGCAGGCAGCTCTGACAGTGAGGCCCGAGATCGTCTCCATCACCTCTT
TCAACGAGTGGCATGAGGGCACCCAGATTGAGAAGGCCATTCCCAAGAAGACGCCAACTC
GGCTGTATCTGGACTACCTGCCCCATCAGCCCAGCCTGTACCTGGAGCTGACGCGCCGCT
GGGCAGAGCACTTCATCAAAGAGAAGGAGCAGTGGCTGATGTGAGGGGCCTGCAAGCTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTACTTTGCCTCCAATGGTTTCTCCTTCGGCTCCTCCCATCAGAACTGGGAAAGCTGTGA
AGAACTTTTGTGATGCCAACAACCTCATGTTTATCCCCAGCGTGGGGCCTGGCTACATTG
ACACCAGCATCCGGCCCTGGAACAACCACAATACGCGGAACAGGGTCAATGGCAAGTACT
ATGAGACGGCCCTGCAGGCAGCTCTGACAGTGAGGCCCGAGATCGTCTCCATCACCTCTT
TCAACGAGTGGCATGAGGGCACCCAGATTGAGAAGGCCATTCCCAAGAAGACGCCAACTC
GGCTGTATCTGGACTACCTGCCCCATCAGCCCAGCCTGTACCTGGAGCTGACGCGCCGCT
GGGCAGAGCACTTCATCAAAGAGAAGGAGCAGTGGCTGATGTGAGGGGCCTGCAAGCTGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|21619436|gb|AAH31903.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21619436|gb|AAH31903.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-411, gnl|bosTau2|chr3 (75297234-75296825)
               

               
               1-411, gnl|Hg17|chr1 (37934566-37934975)
               

               
               1-411, gnl|Mm7|chr4 (124301652-124301243)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-411, gnl|bosTau2|chr3 (75297234-75296825)
               

               
               1-411, gnl|Hg17|chr1 (37934566-37934975)
               

               
               1-411, gnl|Mm7|chr4 (124301652-124301243)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nlu (0.191681)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               ebs (0.118301)

	1-411, gnl\|bosTau2\|chr3 (75297234-75296825)
	1-411, gnl\|Hg17\|chr1 (37934566-37934975)
	1-411, gnl\|Mm7\|chr4 (124301652-124301243)