Ss1.1-rnlu1814b_b8.5
|
GAAGTTCCCAAGCCAGGATTGAAAACAAGCACAGCT------------------------
------------------------------------------------------------
------------TAACCCATTTCACCACAGTGGGAACTCCAGTGTGTTACCTTTTTTAAA
GCTTTATAAAGATATAATTAACCCTGTGCTCTGAAAAGTTACTTTTCTTTCTCTCATTGT
CAAAATATCGACTGATCATAGTTTTCCAAAATTTCTCTCTGAATATGATCTCTTAGGTGT
CTGGAAATTTCAGCCTGGGTTGTGCAGTACATTCAGGAGGCCGTTTTGGGGGTCTTTGGA
TTGTTCTTGGTAGAAGTCTGAAATAGCTCCACCACAATTGCATAGAATACTCTGGGTTGA
ATCATGTGGTCTTGATACATTAAAAAATGCTCTTTGGTAGTTTTTAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAAGTTCCCAAGCCAGGATTGAAAACAAGCACAGCT------------------------
------------------------------------------------------------
------------TAACCCATTTCACCACAGTGGGAACTCCAGTGTGTTACCTTTTTTAAA
GCTTTATAAAGATATAATTAACCCTGTGCTCTGAAAAGTTACTTTTCTTTCTCTCATTGT
CAAAATATCGACTGATCATAGTTTTCCAAAATTTCTCTCTGAATATGATCTCTTAGGTGT
CTGGAAATTTCAGCCTGGGTTGTGCAGTACATTCAGGAGGCCGTTTTGGGGGTCTTTGGA
TTGTTCTTGGTAGAAGTCTGAAATAGCTCCACCACAATTGCATAGAATACTCTGGGTTGA
ATCATGTGGTCTTGATACATTAAAAAATGCTCTTTGGTAGTTTTTAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
110-371, gnl|bosTau2|chr22 (7579895-7579623) |
|
110-371, gnl|canFam2|chr23 (14724497-14724823) |
|
110-371, gnl|canFam2|chr23 (14724587-14724811) |
|
110-371, gnl|dasNov1|scaffold_33873 (11386-11053) |
|
110-371, gnl|echTel1|scaffold_224773 (10298-10638) |
|
110-371, gnl|hg17|chr10 (1064831-1065066) |
|
110-371, gnl|hg17|chr3 (42568312-42568653) |
|
110-371, gnl|Hg17|chr3 (42568648-42568370) |
|
110-371, gnl|loxAfr1|scaffold_13643 (9780-9443) |
|
110-371, gnl|loxAfr1|scaffold_13643 (9692-9456) |
|
110-371, gnl|mm7|chr9 (121383493-121383721) |
|
110-371, gnl|oryCun1|scaffold_212685 (73594-73263) |
|
110-371, gnl|oryCun1|scaffold_212685 (73510-73275) |
|
110-371, gnl|panTro1|chr2 (43768122-43768463) |
|
110-371, gnl|panTro1|chr8 (1131404-1131642) |
|
110-371, gnl|rheMac2|chr2 (94024099-94023758) |
|
110-371, gnl|rheMac2|chr9 (1213119-1213357) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
110-371, gnl|bosTau2|chr22 (7579895-7579623) |
|
110-371, gnl|canFam2|chr23 (14724497-14724823) |
|
110-371, gnl|canFam2|chr23 (14724587-14724811) |
|
110-371, gnl|dasNov1|scaffold_33873 (11386-11053) |
|
110-371, gnl|echTel1|scaffold_224773 (10298-10638) |
|
110-371, gnl|hg17|chr10 (1064831-1065066) |
|
110-371, gnl|hg17|chr3 (42568312-42568653) |
|
110-371, gnl|Hg17|chr3 (42568648-42568370) |
|
110-371, gnl|loxAfr1|scaffold_13643 (9780-9443) |
|
110-371, gnl|loxAfr1|scaffold_13643 (9692-9456) |
|
110-371, gnl|mm7|chr9 (121383493-121383721) |
|
110-371, gnl|oryCun1|scaffold_212685 (73594-73263) |
|
110-371, gnl|oryCun1|scaffold_212685 (73510-73275) |
|
110-371, gnl|panTro1|chr2 (43768122-43768463) |
|
110-371, gnl|panTro1|chr8 (1131404-1131642) |
|
110-371, gnl|rheMac2|chr2 (94024099-94023758) |
|
110-371, gnl|rheMac2|chr9 (1213119-1213357) |
