Ss1.1-rnlu1814b_n12.5
|
CGTGCATTGGCTACAAGTTATTCCCAAACTGCGTCCCCTCCTTTGGGTTCCGCCATCTGC
TGCCTCTCACAGACAGAGTCGACAGCTTCAACGAGGAAGTTCGGAAGCAGAGGGTGTCCC
GGAACCGAGACGCCCCCGAGGGCGGCTTCGACGCAGTGCTCCAGGCTGCTGTCTGCAAGG
AGAAGATTGGTTGGCGGAAGGACGCACTGCACTTGCTGGTGTTCACAACGGACGATGTGC
CCCACATCGCACTGGACGGAAAACTGGGGGGCCTGGTGCAGCCACATGACGGCCAGTGCC
ACCTGAACGAGGCCAACGAGTACACCGCTTCCAACCAGATGGACTATCCATCCCTTGCCT
TGCTTGGAGAGAAGCTGGCAGAGAACAACATCAACC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGTGCATTGGCTACAAGTTATTCCCAAACTGCGTCCCCTCCTTTGGGTTCCGCCATCTGC
TGCCTCTCACAGACAGAGTCGACAGCTTCAACGAGGAAGTTCGGAAGCAGAGGGTGTCCC
GGAACCGAGACGCCCCCGAGGGCGGCTTCGACGCAGTGCTCCAGGCTGCTGTCTGCAAGG
AGAAGATTGGTTGGCGGAAGGACGCACTGCACTTGCTGGTGTTCACAACGGACGATGTGC
CCCACATCGCACTGGACGGAAAACTGGGGGGCCTGGTGCAGCCACATGACGGCCAGTGCC
ACCTGAACGAGGCCAACGAGTACACCGCTTCCAACCAGATGGACTATCCATCCCTTGCCT
TGCTTGGAGAGAAGCTGGCAGAGAACAACATCAACC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
12-180, gnl|bosTau2|chr1 (38284210-38284378) |
|
12-180, gnl|canFam2|chr33 (30913594-30913815) |
|
12-180, gnl|danRer3|chr9 (15138454-15138642) |
|
12-180, gnl|dasNov1|scaffold_14746 (46407-46629) |
|
12-180, gnl|echTel1|scaffold_164207 (1585-1363) |
|
12-180, gnl|fr1|chrUn (201882288-201882477) |
|
12-180, gnl|galGal2|chr7 (28589524-28589735) |
|
12-180, gnl|hg17|chr3 (126042917-126043139) |
|
12-180, gnl|Hg17|chr3 (126043087-126042919) |
|
12-180, gnl|loxAfr1|scaffold_65539 (9723-9945) |
|
12-180, gnl|mm7|chr16 (33559650-33559435) |
|
12-180, gnl|Mm7|chr16 (33559478-33559646) |
|
12-180, gnl|monDom2|scaffold_24 (23636400-23636625) |
|
12-180, gnl|oryCun1|scaffold_201491 (63478-63704) |
|
12-180, gnl|panTro1|chr2 (127871218-127871440) |
|
12-180, gnl|rheMac2|chr2 (44837238-44837460) |
|
12-180, gnl|rn3|chr11 (68765166-68765383) |
|
12-180, gnl|tetNig1|chr2 (6770507-6770301) |
|
12-180, gnl|xenTro1|scaffold_1370 (182661-182848) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
12-180, gnl|bosTau2|chr1 (38284210-38284378) |
|
12-180, gnl|canFam2|chr33 (30913594-30913815) |
|
12-180, gnl|danRer3|chr9 (15138454-15138642) |
|
12-180, gnl|dasNov1|scaffold_14746 (46407-46629) |
|
12-180, gnl|echTel1|scaffold_164207 (1585-1363) |
|
12-180, gnl|fr1|chrUn (201882288-201882477) |
|
12-180, gnl|galGal2|chr7 (28589524-28589735) |
|
12-180, gnl|hg17|chr3 (126042917-126043139) |
|
12-180, gnl|Hg17|chr3 (126043087-126042919) |
|
12-180, gnl|loxAfr1|scaffold_65539 (9723-9945) |
|
12-180, gnl|mm7|chr16 (33559650-33559435) |
|
12-180, gnl|Mm7|chr16 (33559478-33559646) |
|
12-180, gnl|monDom2|scaffold_24 (23636400-23636625) |
|
12-180, gnl|oryCun1|scaffold_201491 (63478-63704) |
|
12-180, gnl|panTro1|chr2 (127871218-127871440) |
|
12-180, gnl|rheMac2|chr2 (44837238-44837460) |
|
12-180, gnl|rn3|chr11 (68765166-68765383) |
|
12-180, gnl|tetNig1|chr2 (6770507-6770301) |
|
12-180, gnl|xenTro1|scaffold_1370 (182661-182848) |
|
nlu (0.191681) |
|
nep (0.183925) |
|
nlu (0.191681) |
|
nep (0.183925) |
