Non-Coding RNA Search

Ss1.1-rnlu1815b_d9.5

Sequence:


               
               AAACGATCTATGCAAATTATGAAATATGCAACAGCTAAACTTCATGGTACATATTAACTA
GTTTTATTTTCTTTACGTAATCAGAAATGTTCTATATAGGCTTCCTGAAAATAAATGTTG
ACAATCATTTTATTAACTAAAGGTGCTACTTATTTTCTAATATTTACCCTGATCATCATT
TCTGTTGAGCTTTATTTCTTCTTTTTTGGGGGGTGGGATGGGGAGCAAAGAGAGAAGTAC
AAAAAAAAATATCTTTTTTGTGTGAATTATGCAGTTTAGCACTGTATACCTTCCTTTGTA
CTCTATTTTTGTTATACTTTATTATTAATCCTACTCATTTTTATTTCAAACCTATTCTGT
TTCTTAGAAAGCATATGCACATATATTTATATACTATGTATGAAAAACCTGTATTGCTTA
TTAAATTAAAATGATGAATAAATGTTTATGTTAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACGATCTATGCAAATTATGAAATATGCAACAGCTAAACTTCATGGTACATATTAACTA
GTTTTATTTTCTTTACGTAATCAGAAATGTTCTATATAGGCTTCCTGAAAATAAATGTTG
ACAATCATTTTATTAACTAAAGGTGCTACTTATTTTCTAATATTTACCCTGATCATCATT
TCTGTTGAGCTTTATTTCTTCTTTTTTGGGGGGTGGGATGGGGAGCAAAGAGAGAAGTAC
AAAAAAAAATATCTTTTTTGTGTGAATTATGCAGTTTAGCACTGTATACCTTCCTTTGTA
CTCTATTTTTGTTATACTTTATTATTAATCCTACTCATTTTTATTTCAAACCTATTCTGT
TTCTTAGAAAGCATATGCACATATATTTATATACTATGTATGAAAAACCTGTATTGCTTA
TTAAATTAAAATGATGAATAAATGTTTATGTTAAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-456, gnl|bosTau2|chr24 (33769345-33769817)
               

               
               1-456, gnl|Hg17|chr12 (58469426-58469890)
               

               
               1-456, gnl|Mm7|chr10 (124713131-124712683)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-456, gnl|bosTau2|chr24 (33769345-33769817)
               

               
               1-456, gnl|Hg17|chr12 (58469426-58469890)
               

               
               1-456, gnl|Mm7|chr10 (124713131-124712683)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               hea (0.204499)
               

               
               nlu (0.191681)
               

               
               mgm (0.180343)
               

               
               fbs (0.175346)
               

               
               fat (0.147427)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               nlu (0.191681)
               

               
               mgm (0.180343)
               

               
               fbs (0.175346)
               

               
               fat (0.147427)

	1-456, gnl\|bosTau2\|chr24 (33769345-33769817)
	1-456, gnl\|Hg17\|chr12 (58469426-58469890)
	1-456, gnl\|Mm7\|chr10 (124713131-124712683)

	hea (0.204499)
	nlu (0.191681)
	mgm (0.180343)
	fbs (0.175346)
	fat (0.147427)