Non-Coding RNA Search

Ss1.1-rnlu1821b_b1.5

Sequence:


               
               CCTCAGCGTGCCCGCGGCCCAGAACCCCGAGGACCTCCGCATGTTTGCCAGGCTTCTGCA
CTACTTCCGAGGCCGCCACCACCTGGAGGAGATCATGTACAACGAGAACACGCGGCGCTC
GCAGCTGCTCGCGCTCGTGGACAAGTTCCGCAGCGTCCTGGTGGTGACCTCGCACGAGGA
CCCGGTCATTGCCGTCTTCCAGGCCCTGCTCACGTGAGCCGAGCTGAGCACGCGGGCACT
GCCCCCTCCCCGGGGCCCTGCTGGCCCCTGCAGGCTGTGGCCTCCGGTCCCTGCTCTGGC
CCAGAGGCCGTGAGGCTCTGGGTGGGGAGTGTCCAGGGCTCACGCCCCTGAGTGAGCTGC
ACGCGCCCCCTGACATGGCCCCCGGTGTGTCAGAGCCCTCTCCCCAGGCTGTCTGGCCCG
CTCTGTGTGCCCGCGGGCACCATCCCCCGGCTGCCTCACCAGGAGGCTCTGGCCTAGCGG
TCACCTCCCTTTGCCATGTGAGGCACAAGGACCGGGACTGACGTCCTGCAGCTGGTGGGG
CCCTGGGGACCGTGCGTTCTCGGCTTCCCACGTGAGTCCGCAGGGGGCTCTTGCACACAG
GCTGCCTCGGGCCTGAGGATGCGTGCGGACTGGCCCCATGTCCTCCCGCAGAGGAGAGCC
GGCCGCCAAGGGGGCTCCGGCTGAGGCCCAAGCGACAGTTTTCTAGAAGCACAGCATTTA
TTTCGTTTCTGAACAATTAAAACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCAGCGTGCCCGCGGCCCAGAACCCCGAGGACCTCCGCATGTTTGCCAGGCTTCTGCA
CTACTTCCGAGGCCGCCACCACCTGGAGGAGATCATGTACAACGAGAACACGCGGCGCTC
GCAGCTGCTCGCGCTCGTGGACAAGTTCCGCAGCGTCCTGGTGGTGACCTCGCACGAGGA
CCCGGTCATTGCCGTCTTCCAGGCCCTGCTCACGTGAGCCGAGCTGAGCACGCGGGCACT
GCCCCCTCCCCGGGGCCCTGCTGGCCCCTGCAGGCTGTGGCCTCCGGTCCCTGCTCTGGC
CCAGAGGCCGTGAGGCTCTGGGTGGGGAGTGTCCAGGGCTCACGCCCCTGAGTGAGCTGC
ACGCGCCCCCTGACATGGCCCCCGGTGTGTCAGAGCCCTCTCCCCAGGCTGTCTGGCCCG
CTCTGTGTGCCCGCGGGCACCATCCCCCGGCTGCCTCACCAGGAGGCTCTGGCCTAGCGG
TCACCTCCCTTTGCCATGTGAGGCACAAGGACCGGGACTGACGTCCTGCAGCTGGTGGGG
CCCTGGGGACCGTGCGTTCTCGGCTTCCCACGTGAGTCCGCAGGGGGCTCTTGCACACAG
GCTGCCTCGGGCCTGAGGATGCGTGCGGACTGGCCCCATGTCCTCCCGCAGAGGAGAGCC
GGCCGCCAAGGGGGCTCCGGCTGAGGCCCAAGCGACAGTTTTCTAGAAGCACAGCATTTA
TTTCGTTTCTGAACAATTAAAACT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               49-742, gnl|bosTau2|chr25 (2567144-2566452)
               

               
               49-742, gnl|Hg17|chr16 (76871-75802)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               49-742, gnl|bosTau2|chr25 (2567144-2566452)
               

               
               49-742, gnl|Hg17|chr16 (76871-75802)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nlu (0.191681)
               

               
               nco (0.161734)
               

               
               jej (0.0989218)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               nco (0.161734)
               

               
               jej (0.0989218)

	49-742, gnl\|bosTau2\|chr25 (2567144-2566452)
	49-742, gnl\|Hg17\|chr16 (76871-75802)