Non-Coding RNA Search

Ss1.1-rnlu1823b_k24.5

Sequence:


               
               CTTCCAGTTTTTAAAGGGTTTATTGGAGTATAGTTGGTTTAAAAGGTTGTGATAATTTCT
GCTGTACAGAAAAGTGATTCAGTCATACCTGTACACACATCCATTCTCATTAAGATTCTT
TTCCCACATAGATTATCACAGAATACTGGGTAGAGTTCTCTGTGCTATATAGCAGGTCCC
TGTTGACCAATCATTCCATATATCTCAATGCGCATGTGCCAACTCCAACCTCCTCCTGCC
CCTCCCACCCCGTTCATCACTCCCCACCCCTATTTTTTCTTTCACTCCTGCCCCTTCGTC
GACCCCCGGCACTTTCCCTTCCTTCTTCACATCTGCCTTGCCTACTTTTCCTTCTTTTCC
TTCCTTTCCCTTCTTTCCTCCTCTTCTCTGATTCACTCACATAACAAGTGTTTCTTGGGC
ATTTTCTTTGTGCCAGGCATGGTGACTGGCATAGGAAACAGAGTAGGAAGAAAATATTGA
TGGGAAAGACAGAAATTTAATGAGTAATGACTTGACATCATTCATCTCATAGATGGTCCT
CTCTCAGGCCCTGTGCAAAGAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCCAGTTTTTAAAGGGTTTATTGGAGTATAGTTGGTTTAAAAGGTTGTGATAATTTCT
GCTGTACAGAAAAGTGATTCAGTCATACCTGTACACACATCCATTCTCATTAAGATTCTT
TTCCCACATAGATTATCACAGAATACTGGGTAGAGTTCTCTGTGCTATATAGCAGGTCCC
TGTTGACCAATCATTCCATATATCTCAATGCGCATGTGCCAACTCCAACCTCCTCCTGCC
CCTCCCACCCCGTTCATCACTCCCCACCCCTATTTTTTCTTTCACTCCTGCCCCTTCGTC
GACCCCCGGCACTTTCCCTTCCTTCTTCACATCTGCCTTGCCTACTTTTCCTTCTTTTCC
TTCCTTTCCCTTCTTTCCTCCTCTTCTCTGATTCACTCACATAACAAGTGTTTCTTGGGC
ATTTTCTTTGTGCCAGGCATGGTGACTGGCATAGGAAACAGAGTAGGAAGAAAATATTGA
TGGGAAAGACAGAAATTTAATGAGTAATGACTTGACATCATTCATCTCATAGATGGTCCT
CTCTCAGGCCCTGTGCAAAGAATT

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               8-265, gnl|bosTau2|chr1 (54258785-54258530)
               


               
               21-263, gnl|bosTau2|chr18 (52251691-52251934)
               

               
               21-263, gnl|canFam2|chr1 (108716557-108716214)
               

               
               21-263, gnl|hg17|chr19 (56249174-56249519)
               

               
               21-263, gnl|panTro1|chr20 (53692691-53693036)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-265, gnl|bosTau2|chr1 (54258785-54258530)
               


               
               21-263, gnl|bosTau2|chr18 (52251691-52251934)
               

               
               21-263, gnl|canFam2|chr1 (108716557-108716214)
               

               
               21-263, gnl|hg17|chr19 (56249174-56249519)
               

               
               21-263, gnl|panTro1|chr20 (53692691-53693036)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nlu (0.383362)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.383362)

	8-265, gnl\|bosTau2\|chr1 (54258785-54258530)

	21-263, gnl\|bosTau2\|chr18 (52251691-52251934)
	21-263, gnl\|canFam2\|chr1 (108716557-108716214)
	21-263, gnl\|hg17\|chr19 (56249174-56249519)
	21-263, gnl\|panTro1\|chr20 (53692691-53693036)