Ss1.1-rnlu1831b_k22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCGCTCGCCTTCTGCTGCTATACGTCGGTGCTTCTGCTTTTCGCCTTCTCCCTGCCCG GGAGCCGCGCGTCCAACCAGCCCCCGGGTGGCGGCGGCGGCGGGGACTGTCCCGGCGGCA AAGGCAAGAGCATCGACTGCTCAGAATTAAATGTGAGGGAATCTGATATAAGAGTTTGTG ATGAATCATCATGTAAATATGGAGGAGTCTGTAAAGAAGACGGAGATGGTTTGAAATGCG CATGTCAGTTTCAGTGCCATACAAATTACATTCCTGTCTGTGGATCAAATGGGGACACTT ATCAAAATGAATGCTTTCTCAGAAGGGCTGCTTGTAAGCACCAGAAAGAGATAACAGTAG TAGCAAGAGGACCATGCTACTCTGATAATGGCTCTGGATCTGGAGAGGGAGAAGAGGAAG GGTCAGGGGCTGAAGTTCACAGAAAACATTCCAAGTGTGGACCTTGCAAGTATAAAGCTG AGTGTGATGAAGATGCAGAAAATGTTGGGTGTGTATGTAATATAGATTGCAGTGGATACA GTTTTAATCCTGTGTGTGCTTCTGATGGGAGTTCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCGCTCGCCTTCTGCTGCTATACGTCGGTGCTTCTGCTTTTCGCCTTCTCCCTGCCCG GGAGCCGCGCGTCCAACCAGCCCCCGGGTGGCGGCGGCGGCGGGGACTGTCCCGGCGGCA AAGGCAAGAGCATCGACTGCTCAGAATTAAATGTGAGGGAATCTGATATAAGAGTTTGTG ATGAATCATCATGTAAATATGGAGGAGTCTGTAAAGAAGACGGAGATGGTTTGAAATGCG CATGTCAGTTTCAGTGCCATACAAATTACATTCCTGTCTGTGGATCAAATGGGGACACTT ATCAAAATGAATGCTTTCTCAGAAGGGCTGCTTGTAAGCACCAGAAAGAGATAACAGTAG TAGCAAGAGGACCATGCTACTCTGATAATGGCTCTGGATCTGGAGAGGGAGAAGAGGAAG GGTCAGGGGCTGAAGTTCACAGAAAACATTCCAAGTGTGGACCTTGCAAGTATAAAGCTG AGTGTGATGAAGATGCAGAAAATGTTGGGTGTGTATGTAATATAGATTGCAGTGGATACA GTTTTAATCCTGTGTGTGCTTCTGATGGGAGTTCCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 249-387, gnl|bosTau2|chr8 (49550670-49550808) | |
| 249-387, gnl|canFam2|chr11 (60431065-60431229) | |
| 249-387, gnl|danRer3|chr9 (19134220-19134053) | |
| 249-387, gnl|echTel1|scaffold_308725 (103706-103542) | |
| 249-387, gnl|fr1|chrUn (296344895-296345051) | |
| 249-387, gnl|galGal2|chr2 (88591371-88591521) | |
| 249-387, gnl|hg17|chr9 (100350811-100350975) | |
| 249-387, gnl|Hg17|chr9 (100350836-100350974) | |
| 249-387, gnl|loxAfr1|scaffold_92678 (997-853) | |
| 249-387, gnl|mm7|chr4 (48624198-48624360) | |
| 249-387, gnl|Mm7|chr4 (48624221-48624359) | |
| 249-387, gnl|monDom2|scaffold_19 (14346113-14345952) | |
| 249-387, gnl|oryCun1|scaffold_185704 (5139-4975) | |
| 249-387, gnl|panTro1|chr11 (84580118-84580282) | |
| 249-387, gnl|rheMac2|chr15 (35703033-35702869) | |
| 249-387, gnl|rn3|chr5 (65301294-65301459) | |
| 249-387, gnl|tetNig1|chrUn_random (851593-851446) | |
| 249-387, gnl|xenTro1|scaffold_89 (1151145-1151308) | |
| 410-514, gnl|bosTau2|chr8 (49557628-49557732) | |
| 410-514, gnl|canFam2|chr11 (60437912-60438051) | |
| 410-514, gnl|dasNov1|scaffold_73773 (1594-1469) | |
| 410-514, gnl|echTel1|scaffold_308725 (93741-93610) | |
| 410-514, gnl|fr1|chrUn (296345326-296345433) | |
| 410-514, gnl|hg17|chr9 (100358502-100358641) | |
| 410-514, gnl|Hg17|chr9 (100358510-100358614) | |
| 410-514, gnl|loxAfr1|scaffold_45325 (5414-5553) | |
| 410-514, gnl|mm7|chr4 (48631039-48631175) | |
| 410-514, gnl|Mm7|chr4 (48631047-48631151) | |
| 410-514, gnl|monDom2|scaffold_19 (14318398-14318259) | |
| 410-514, gnl|oryCun1|scaffold_101956 (830-969) | |
| 410-514, gnl|panTro1|chr11 (84587801-84587940) | |
| 410-514, gnl|rheMac2|chr15 (35695680-35695541) | |
| 410-514, gnl|rn3|chr5 (65307760-65307875) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 249-387, gnl|bosTau2|chr8 (49550670-49550808) | |
| 249-387, gnl|canFam2|chr11 (60431065-60431229) | |
| 249-387, gnl|danRer3|chr9 (19134220-19134053) | |
| 249-387, gnl|echTel1|scaffold_308725 (103706-103542) | |
| 249-387, gnl|fr1|chrUn (296344895-296345051) | |
| 249-387, gnl|galGal2|chr2 (88591371-88591521) | |
| 249-387, gnl|hg17|chr9 (100350811-100350975) | |
| 249-387, gnl|Hg17|chr9 (100350836-100350974) | |
| 249-387, gnl|loxAfr1|scaffold_92678 (997-853) | |
| 249-387, gnl|mm7|chr4 (48624198-48624360) | |
| 249-387, gnl|Mm7|chr4 (48624221-48624359) | |
| 249-387, gnl|monDom2|scaffold_19 (14346113-14345952) | |
| 249-387, gnl|oryCun1|scaffold_185704 (5139-4975) | |
| 249-387, gnl|panTro1|chr11 (84580118-84580282) | |
| 249-387, gnl|rheMac2|chr15 (35703033-35702869) | |
| 249-387, gnl|rn3|chr5 (65301294-65301459) | |
| 249-387, gnl|tetNig1|chrUn_random (851593-851446) | |
| 249-387, gnl|xenTro1|scaffold_89 (1151145-1151308) | |
| 410-514, gnl|bosTau2|chr8 (49557628-49557732) | |
| 410-514, gnl|canFam2|chr11 (60437912-60438051) | |
| 410-514, gnl|dasNov1|scaffold_73773 (1594-1469) | |
| 410-514, gnl|echTel1|scaffold_308725 (93741-93610) | |
| 410-514, gnl|fr1|chrUn (296345326-296345433) | |
| 410-514, gnl|hg17|chr9 (100358502-100358641) | |
| 410-514, gnl|Hg17|chr9 (100358510-100358614) | |
| 410-514, gnl|loxAfr1|scaffold_45325 (5414-5553) | |
| 410-514, gnl|mm7|chr4 (48631039-48631175) | |
| 410-514, gnl|Mm7|chr4 (48631047-48631151) | |
| 410-514, gnl|monDom2|scaffold_19 (14318398-14318259) | |
| 410-514, gnl|oryCun1|scaffold_101956 (830-969) | |
| 410-514, gnl|panTro1|chr11 (84587801-84587940) | |
| 410-514, gnl|rheMac2|chr15 (35695680-35695541) | |
| 410-514, gnl|rn3|chr5 (65307760-65307875) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nlu (0.191681) | |
| ova (0.129132) | |
| ebs (0.118301) | |
| ecc (0.115035) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) | |
| ova (0.129132) | |
| ebs (0.118301) | |
| ecc (0.115035) |