Ss1.1-rnlu1833b_g2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGCCACCCCACCCAAGCTCCACACGTGTGAGAAGTGCAGCACCAGCATCGCGAACCAG GCTGTGCGCATCCAGGAGGGGCGGTACCGCCATCCCGGCTGCTACACCTGTGCCGACTGC GGGCTGAACTTAAAGATGCGCGGGCACTTCTGGGTGGGGGACGAGCTGTACTGCGAGAAG CATGCCCGCCAGCGCTACTCTGCACCCTCCACCCTCAACTCCCAAGCCTGAGCGCCAGTT GCGTGTTCGGCACCCCTCCAACCCCACCCCACCGCCCTCTGCTGGCACCTCCGTGCCAGG GCCCAGCCAATAGCGAGTTCCTGTGGAAAGGCCTTGCGGGGTGGGGTGGGTCCCTTTCTC CTCACTGAGTGAGGCCAGAGGCTGGGACCTGTCTGTGCTGTGGGTGAGGGCGGCCTCACC TCACCTCTGCTGGATTCTCTCGCGTCCCCCTGCTGGACAGGCTCTGCACCAAAGTCTGAA GTGGACGCTGCATTGGACATGTTTGTGCAACAGGGGTTCAGCAGGTTCGGACATGGAGAT AAGCATCTAGAAGGAGAGGGGTGGGCCAGAGGCTACAGGTATTCACTGTGTAATGTTTTC GACGTATGAGCTCTATAAATATATACTATTCGGTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGCCACCCCACCCAAGCTCCACACGTGTGAGAAGTGCAGCACCAGCATCGCGAACCAG GCTGTGCGCATCCAGGAGGGGCGGTACCGCCATCCCGGCTGCTACACCTGTGCCGACTGC GGGCTGAACTTAAAGATGCGCGGGCACTTCTGGGTGGGGGACGAGCTGTACTGCGAGAAG CATGCCCGCCAGCGCTACTCTGCACCCTCCACCCTCAACTCCCAAGCCTGAGCGCCAGTT GCGTGTTCGGCACCCCTCCAACCCCACCCCACCGCCCTCTGCTGGCACCTCCGTGCCAGG GCCCAGCCAATAGCGAGTTCCTGTGGAAAGGCCTTGCGGGGTGGGGTGGGTCCCTTTCTC CTCACTGAGTGAGGCCAGAGGCTGGGACCTGTCTGTGCTGTGGGTGAGGGCGGCCTCACC TCACCTCTGCTGGATTCTCTCGCGTCCCCCTGCTGGACAGGCTCTGCACCAAAGTCTGAA GTGGACGCTGCATTGGACATGTTTGTGCAACAGGGGTTCAGCAGGTTCGGACATGGAGAT AAGCATCTAGAAGGAGAGGGGTGGGCCAGAGGCTACAGGTATTCACTGTGTAATGTTTTC GACGTATGAGCTCTATAAATATATACTATTCGGTGG |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 54-233, gnl|bosTau2|chr8 (30953801-30953622) | |
| 54-233, gnl|canFam2|chr25 (37675250-37674746) | |
| 54-233, gnl|hg17|chr2 (119499849-119500356) | |
| 54-233, gnl|Hg17|chr8 (22507191-22507379) | |
| 54-233, gnl|loxAfr1|scaffold_30635 (63323-62789) | |
| 54-233, gnl|mm7|chr14 (64809207-64808723) | |
| 54-233, gnl|Mm7|chr14 (64809277-64809098) | |
| 54-233, gnl|panTro1|chr13 (5520278-5520786) | |
| 54-233, gnl|rheMac2|chr13 (125189707-125190212) | |
| 54-233, gnl|rn3|chr15 (50580356-50579896) | |
| 369-632, gnl|bosTau2|chr8 (30953535-30953268) | |
| 369-632, gnl|canFam2|chr25 (37675044-37674716) | |
| 369-632, gnl|canFam2|chr25 (37675250-37674746) | |
| 369-632, gnl|hg17|chr2 (119499849-119500356) | |
| 369-632, gnl|hg17|chr8 (22507461-22507795) | |
| 369-632, gnl|Hg17|chr8 (22507505-22507743) | |
| 369-632, gnl|loxAfr1|scaffold_30635 (63120-62757) | |
| 369-632, gnl|loxAfr1|scaffold_30635 (63323-62789) | |
| 369-632, gnl|mm7|chr14 (64809001-64808692) | |
| 369-632, gnl|mm7|chr14 (64809207-64808723) | |
| 369-632, gnl|Mm7|chr14 (64808960-64808728) | |
| 369-632, gnl|monDom2|scaffold_1 (72871342-72871019) | |
| 369-632, gnl|panTro1|chr13 (5520278-5520786) | |
| 369-632, gnl|panTro1|chr7 (23443798-23444132) | |
| 369-632, gnl|rheMac2|chr13 (125189707-125190212) | |
| 369-632, gnl|rheMac2|chr8 (22543657-22543990) | |
| 369-632, gnl|rn3|chr15 (50580167-50579865) | |
| 369-632, gnl|rn3|chr15 (50580356-50579896) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 54-233, gnl|bosTau2|chr8 (30953801-30953622) | |
| 54-233, gnl|canFam2|chr25 (37675250-37674746) | |
| 54-233, gnl|hg17|chr2 (119499849-119500356) | |
| 54-233, gnl|Hg17|chr8 (22507191-22507379) | |
| 54-233, gnl|loxAfr1|scaffold_30635 (63323-62789) | |
| 54-233, gnl|mm7|chr14 (64809207-64808723) | |
| 54-233, gnl|Mm7|chr14 (64809277-64809098) | |
| 54-233, gnl|panTro1|chr13 (5520278-5520786) | |
| 54-233, gnl|rheMac2|chr13 (125189707-125190212) | |
| 54-233, gnl|rn3|chr15 (50580356-50579896) | |
| 369-632, gnl|bosTau2|chr8 (30953535-30953268) | |
| 369-632, gnl|canFam2|chr25 (37675044-37674716) | |
| 369-632, gnl|canFam2|chr25 (37675250-37674746) | |
| 369-632, gnl|hg17|chr2 (119499849-119500356) | |
| 369-632, gnl|hg17|chr8 (22507461-22507795) | |
| 369-632, gnl|Hg17|chr8 (22507505-22507743) | |
| 369-632, gnl|loxAfr1|scaffold_30635 (63120-62757) | |
| 369-632, gnl|loxAfr1|scaffold_30635 (63323-62789) | |
| 369-632, gnl|mm7|chr14 (64809001-64808692) | |
| 369-632, gnl|mm7|chr14 (64809207-64808723) | |
| 369-632, gnl|Mm7|chr14 (64808960-64808728) | |
| 369-632, gnl|monDom2|scaffold_1 (72871342-72871019) | |
| 369-632, gnl|panTro1|chr13 (5520278-5520786) | |
| 369-632, gnl|panTro1|chr7 (23443798-23444132) | |
| 369-632, gnl|rheMac2|chr13 (125189707-125190212) | |
| 369-632, gnl|rheMac2|chr8 (22543657-22543990) | |
| 369-632, gnl|rn3|chr15 (50580167-50579865) | |
| 369-632, gnl|rn3|chr15 (50580356-50579896) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| ton (0.351) | |
| csp (0.322373) | |
| lnt (0.284616) | |
| nlu (0.191681) | |
| nco (0.161734) | |
| cag (0.151194) | |
| che (0.136314) | |
| pla (0.133672) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ton (0.351) | |
| csp (0.322373) | |
| lnt (0.284616) | |
| nlu (0.191681) | |
| nco (0.161734) | |
| cag (0.151194) | |
| che (0.136314) | |
| pla (0.133672) |