Non-Coding RNA Search

Ss1.1-rnmm06c_a6.5

Sequence:


               
               CAACATCAAGCCACAAAATGTAAAGGCCAAAGGCAGGACCTTTCCACTCAAGTTCGAGGT
GTTCAAGGTTGACTCTCAGTTCCAGCTCTTCGGAGAGAGGTTGCCGTCCACCTTTTTTTC
CACGTTCAGAATTGCCGAGAAGGGCATCGTTTCTGAAACCACACGCAACCTTACCGAGTG
CTTCAGCCTGAGCCCTGGGACCTACGTGGTGGTCGTCTCCCCAGACAGAGAAGCAGTTGA
GTTCCTGCTCCGCATCTTCCTGAAGATGCCAGACAGTGACAGGAACCAGGACAGCAATCT
CAACCTCAGACCGCTGAAGATCCAGGCAAGTCTTCCAGAAAATGACACCCCACAGAGCAT
GTTCTACAGATACGCTCAGCAGGGACGGTTCTTGGACGCTACCCAGCTTCAGGGTCTCCT
CAACCAGGAATTCCTGAAAGGATCTCCAGGGGACACATTCTCTTTGGATGAGTGCCGGAG
CATCGTGGCTCTGATGGATCTGGAGGTGAACGGGCGGCTTAACGAACAGGAGTTTTCAAG
GCTGTGGCGCCGTCTTGTCCATTGCCAGGCAAACCTTAGGGAGCTCACCACCTCCCTGGG
AAGCAAGCAGCAAGCTGCCCTGGGCAGCAGGAGCCCAGTCTGAGGCGTGAGGAAGAGGAA
GGAGGGCAGAGTGTTTTCTGGAACGCCCGGAAGAACTCCGGAGTTTTCCTGAGCTCAGAT
TTGCAGAAGGCCATACAGGACACAGACTTCCTTGCAGGGGTCTCTGTCACCAGCGAGCTT
CTGGATCTCATGAGCCTCCGTTACAGCGACAGCACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAACATCAAGCCACAAAATGTAAAGGCCAAAGGCAGGACCTTTCCACTCAAGTTCGAGGT
GTTCAAGGTTGACTCTCAGTTCCAGCTCTTCGGAGAGAGGTTGCCGTCCACCTTTTTTTC
CACGTTCAGAATTGCCGAGAAGGGCATCGTTTCTGAAACCACACGCAACCTTACCGAGTG
CTTCAGCCTGAGCCCTGGGACCTACGTGGTGGTCGTCTCCCCAGACAGAGAAGCAGTTGA
GTTCCTGCTCCGCATCTTCCTGAAGATGCCAGACAGTGACAGGAACCAGGACAGCAATCT
CAACCTCAGACCGCTGAAGATCCAGGCAAGTCTTCCAGAAAATGACACCCCACAGAGCAT
GTTCTACAGATACGCTCAGCAGGGACGGTTCTTGGACGCTACCCAGCTTCAGGGTCTCCT
CAACCAGGAATTCCTGAAAGGATCTCCAGGGGACACATTCTCTTTGGATGAGTGCCGGAG
CATCGTGGCTCTGATGGATCTGGAGGTGAACGGGCGGCTTAACGAACAGGAGTTTTCAAG
GCTGTGGCGCCGTCTTGTCCATTGCCAGGCAAACCTTAGGGAGCTCACCACCTCCCTGGG
AAGCAAGCAGCAAGCTGCCCTGGGCAGCAGGAGCCCAGTCTGAGGCGTGAGGAAGAGGAA
GGAGGGCAGAGTGTTTTCTGGAACGCCCGGAAGAACTCCGGAGTTTTCCTGAGCTCAGAT
TTGCAGAAGGCCATACAGGACACAGACTTCCTTGCAGGGGTCTCTGTCACCAGCGAGCTT
CTGGATCTCATGAGCCTCCGTTACAGCGACAGCACT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62650360|ref|XP_343020.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62650360|ref|XP_343020.2|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               73-286, gnl|bosTau2|chr11 (50121790-50122002)
               

               
               73-286, gnl|Hg17|chr2 (30878108-30877896)
               

               
               73-286, gnl|Mm7|chr17 (71619562-71619350)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               73-286, gnl|bosTau2|chr11 (50121790-50122002)
               

               
               73-286, gnl|Hg17|chr2 (30878108-30877896)
               

               
               73-286, gnl|Mm7|chr17 (71619562-71619350)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.265604)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.265604)

	73-286, gnl\|bosTau2\|chr11 (50121790-50122002)
	73-286, gnl\|Hg17\|chr2 (30878108-30877896)
	73-286, gnl\|Mm7\|chr17 (71619562-71619350)