Non-Coding RNA Search

Ss1.1-rnmm08c_a2.5

Sequence:


               
               ACTCTGGAGGCAGAATTCAACAGCCCGTCCCCCCCAACACCTGAGCCAGGTGAAGGGTCG
TGTAAATTGGAAGGATGCACAAGTTCCAAGGTTACCTTTGAGCCTCCCAGTAGCACTGGA
TGCAGGAGACAATACATTGGCAGTGAAAAACAAGCTGAACCAGTTGTAGTTTTAGATCCT
GTTTCCACATATGAACCCCAAACCAAAGACCAGGTTGCTGAAAAAGATCCAACTCAACAC
AAGGATGGTGAAGGCGAAATTAAACCAGAATACAAAGAAGACAGCGTTGAGAAAATAAGA
GATACGGATAGCTCCAACTGCTGATCCATAAACCAGAAGGCTGACATGTTCAGAAGTCCT
TTTTAATAAGCACATGATTAGTTCTGATGTATTGGCAAGGGCTATAGACATTCTGTTCTT
GTCACTGTATTCAGAATATAGGTTCTTTTCTGATGTCACTTTTGTAAGTAGTTGACCTAT
AAATATAAGTAAGCTATTTAGCAAAATACACATTCTTTGTAGGGTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTCTGGAGGCAGAATTCAACAGCCCGTCCCCCCCAACACCTGAGCCAGGTGAAGGGTCG
TGTAAATTGGAAGGATGCACAAGTTCCAAGGTTACCTTTGAGCCTCCCAGTAGCACTGGA
TGCAGGAGACAATACATTGGCAGTGAAAAACAAGCTGAACCAGTTGTAGTTTTAGATCCT
GTTTCCACATATGAACCCCAAACCAAAGACCAGGTTGCTGAAAAAGATCCAACTCAACAC
AAGGATGGTGAAGGCGAAATTAAACCAGAATACAAAGAAGACAGCGTTGAGAAAATAAGA
GATACGGATAGCTCCAACTGCTGATCCATAAACCAGAAGGCTGACATGTTCAGAAGTCCT
TTTTAATAAGCACATGATTAGTTCTGATGTATTGGCAAGGGCTATAGACATTCTGTTCTT
GTCACTGTATTCAGAATATAGGTTCTTTTCTGATGTCACTTTTGTAAGTAGTTGACCTAT
AAATATAAGTAAGCTATTTAGCAAAATACACATTCTTTGTAGGGTTTT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|7023592|dbj|BAA92019.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|7023592|dbj|BAA92019.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               102-528, gnl|bosTau2|chr26 (24130159-24129747)
               

               
               102-528, gnl|Hg17|chr10 (118636067-118635638)
               

               
               102-528, gnl|Mm7|chr19 (58897426-58897022)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               102-528, gnl|bosTau2|chr26 (24130159-24129747)
               

               
               102-528, gnl|Hg17|chr10 (118636067-118635638)
               

               
               102-528, gnl|Mm7|chr19 (58897426-58897022)

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

Help | Less info


               
               ecc (0.23007)
               

               
               sin (0.174948)
               

               
               pla (0.133672)
               

               
               nmm (0.132802)
               

               
               kid (0.129735)
               

               
               tra (0.123092)
               

               
               ebs (0.118301)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.23007)
               

               
               sin (0.174948)
               

               
               pla (0.133672)
               

               
               nmm (0.132802)
               

               
               kid (0.129735)
               

               
               tra (0.123092)
               

               
               ebs (0.118301)

	102-528, gnl\|bosTau2\|chr26 (24130159-24129747)
	102-528, gnl\|Hg17\|chr10 (118636067-118635638)
	102-528, gnl\|Mm7\|chr19 (58897426-58897022)

	ecc (0.23007)
	sin (0.174948)
	pla (0.133672)
	nmm (0.132802)
	kid (0.129735)
	tra (0.123092)
	ebs (0.118301)