Ss1.1-rnmm08c_o1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGTGGAAAAAAAGCAAGATATCGACCATGTATTACCTTAACCAAGATGCCAAATTATCT AACTGGTTTCTCCAGGCAAGCAGCCCAACCACAGGGACAGCCCCCAGGAGCCAGTCACGC TTGTCTGTCTGTCCATCCACTCAGGACATCTGCAGGATCTGCCACTGCGAAGGGGATGAG GACAGCCCCCTCATCACACCCTGCCGCTGCACTGGCACCCTGCGCTTCGTGCACCAGGCC TGCCTGCACCAGTGGATCAAGAGCTCAGACACACGCTGCTGTGAACTCTGCAAGTACGAC TTTGTCATGGAGACCAAGCTCAAGCCCTTACGCAAGTGGGAGAAACTGCAGATGACCACC AGCGAAAGAAGGAAAATATTCTGCTCTGTCACCTTCCACGTCATCGCCATCACCTGTGTG GTTTGGTCTTTGTACGTGTTGATAGACAGGACAGCGGAGGAAATCAAGCAAGGCAATGAT AACGGTGTCCTTGAGTGGCCGTTCTGGACCAAGCTGGTGGTGGTGGCCATTGGCTTCACA GGGGGCCTGGTCTTCATGTATGTTCAGTGCAAAGTCTACATCCAGCTCTGGCGCAGGCTC AAGGCCTACAATCGTGTGATCTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGTGGAAAAAAAGCAAGATATCGACCATGTATTACCTTAACCAAGATGCCAAATTATCT AACTGGTTTCTCCAGGCAAGCAGCCCAACCACAGGGACAGCCCCCAGGAGCCAGTCACGC TTGTCTGTCTGTCCATCCACTCAGGACATCTGCAGGATCTGCCACTGCGAAGGGGATGAG GACAGCCCCCTCATCACACCCTGCCGCTGCACTGGCACCCTGCGCTTCGTGCACCAGGCC TGCCTGCACCAGTGGATCAAGAGCTCAGACACACGCTGCTGTGAACTCTGCAAGTACGAC TTTGTCATGGAGACCAAGCTCAAGCCCTTACGCAAGTGGGAGAAACTGCAGATGACCACC AGCGAAAGAAGGAAAATATTCTGCTCTGTCACCTTCCACGTCATCGCCATCACCTGTGTG GTTTGGTCTTTGTACGTGTTGATAGACAGGACAGCGGAGGAAATCAAGCAAGGCAATGAT AACGGTGTCCTTGAGTGGCCGTTCTGGACCAAGCTGGTGGTGGTGGCCATTGGCTTCACA GGGGGCCTGGTCTTCATGTATGTTCAGTGCAAAGTCTACATCCAGCTCTGGCGCAGGCTC AAGGCCTACAATCGTGTGATCTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 152-338, gnl|bosTau2|chr28 (34268663-34268476) | |
| 152-338, gnl|canFam2|chr28 (5157814-5157597) | |
| 152-338, gnl|danRer3|chr13 (15477388-15477630) | |
| 152-338, gnl|dasNov1|scaffold_14271 (15828-16045) | |
| 152-338, gnl|echTel1|scaffold_303346 (14494-14708) | |
| 152-338, gnl|fr1|chrUn (118870645-118870448) | |
| 152-338, gnl|galGal2|chr6 (16844249-16844462) | |
| 152-338, gnl|hg17|chr10 (45276679-45276896) | |
| 152-338, gnl|Hg17|chr10 (45276869-45276682) | |
| 152-338, gnl|loxAfr1|scaffold_157983 (4125-4341) | |
| 152-338, gnl|mm7|chr6 (116429281-116429065) | |
| 152-338, gnl|Mm7|chr6 (116429089-116429276) | |
| 152-338, gnl|monDom2|scaffold_41 (11267074-11267292) | |
| 152-338, gnl|oryCun1|scaffold_214270 (3574-3357) | |
| 152-338, gnl|panTro1|chr8 (46215076-46215293) | |
| 152-338, gnl|rheMac2|chr9 (45819570-45819787) | |
| 152-338, gnl|rn3|chr4 (152848833-152848617) | |
| 152-338, gnl|tetNig1|chr17 (5439690-5439506) | |
| 152-338, gnl|xenTro1|scaffold_171 (1474568-1474355) | |
| 488-622, gnl|bosTau2|chr28 (34264212-34264078) | |
| 488-622, gnl|Hg17|chr10 (45273994-45273860) | |
| 488-622, gnl|Mm7|chr6 (116431701-116431835) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 152-338, gnl|bosTau2|chr28 (34268663-34268476) | |
| 152-338, gnl|canFam2|chr28 (5157814-5157597) | |
| 152-338, gnl|danRer3|chr13 (15477388-15477630) | |
| 152-338, gnl|dasNov1|scaffold_14271 (15828-16045) | |
| 152-338, gnl|echTel1|scaffold_303346 (14494-14708) | |
| 152-338, gnl|fr1|chrUn (118870645-118870448) | |
| 152-338, gnl|galGal2|chr6 (16844249-16844462) | |
| 152-338, gnl|hg17|chr10 (45276679-45276896) | |
| 152-338, gnl|Hg17|chr10 (45276869-45276682) | |
| 152-338, gnl|loxAfr1|scaffold_157983 (4125-4341) | |
| 152-338, gnl|mm7|chr6 (116429281-116429065) | |
| 152-338, gnl|Mm7|chr6 (116429089-116429276) | |
| 152-338, gnl|monDom2|scaffold_41 (11267074-11267292) | |
| 152-338, gnl|oryCun1|scaffold_214270 (3574-3357) | |
| 152-338, gnl|panTro1|chr8 (46215076-46215293) | |
| 152-338, gnl|rheMac2|chr9 (45819570-45819787) | |
| 152-338, gnl|rn3|chr4 (152848833-152848617) | |
| 152-338, gnl|tetNig1|chr17 (5439690-5439506) | |
| 152-338, gnl|xenTro1|scaffold_171 (1474568-1474355) | |
| 488-622, gnl|bosTau2|chr28 (34264212-34264078) | |
| 488-622, gnl|Hg17|chr10 (45273994-45273860) | |
| 488-622, gnl|Mm7|chr6 (116431701-116431835) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fli (0.202881) | |
| nmm (0.132802) |