Non-Coding RNA Search

Ss1.1-rnmm09c_a5.5

Sequence:


               
               GCTCTTTGTTCAAGAGGAAGAGAAAACAAAGCATCTTATTTTCTTTTTAAAAAATTTTAA
ACCATGGGAAAAGATATTTTTAAAGAAATCCACCCAGAACATTAAAGTTCATTATATTAA
GTATTTATCATGTGTGAGAATAATAAGTATATAATTGCAGCTCGTAGGTCCCTTTCCCTA
ATCTCTTAGGTTGTATGAGTAGGGTTTGCTTGGTGCCAGTCCTGTGCCCTTTTTTCTCCT
ATCATCTGTAGTTGTGATCAGAAAAAGATATCCGCACTGCACTGTCAGAATCTCTTCACT
ACGTTGTGTGTTAAATTACCGTAGCTCTTTGTTTCATGAAATAAACTGTGAATTTTTTTT
TTATTTTTATTTTTTTGCAGGAGGGTGTGCAGGCTATGTAAAAAAATAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCTTTGTTCAAGAGGAAGAGAAAACAAAGCATCTTATTTTCTTTTTAAAAAATTTTAA
ACCATGGGAAAAGATATTTTTAAAGAAATCCACCCAGAACATTAAAGTTCATTATATTAA
GTATTTATCATGTGTGAGAATAATAAGTATATAATTGCAGCTCGTAGGTCCCTTTCCCTA
ATCTCTTAGGTTGTATGAGTAGGGTTTGCTTGGTGCCAGTCCTGTGCCCTTTTTTCTCCT
ATCATCTGTAGTTGTGATCAGAAAAAGATATCCGCACTGCACTGTCAGAATCTCTTCACT
ACGTTGTGTGTTAAATTACCGTAGCTCTTTGTTTCATGAAATAAACTGTGAATTTTTTTT
TTATTTTTATTTTTTTGCAGGAGGGTGTGCAGGCTATGTAAAAAAATAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-360, gnl|bosTau2|chr7 (21495163-21495519)
               

               
               1-360, gnl|Hg17|chr5 (176656909-176657271)
               

               
               1-360, gnl|Mm7|chr13 (54395780-54396154)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-360, gnl|bosTau2|chr7 (21495163-21495519)
               

               
               1-360, gnl|Hg17|chr5 (176656909-176657271)
               

               
               1-360, gnl|Mm7|chr13 (54395780-54396154)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	1-360, gnl\|bosTau2\|chr7 (21495163-21495519)
	1-360, gnl\|Hg17\|chr5 (176656909-176657271)
	1-360, gnl\|Mm7\|chr13 (54395780-54396154)