Non-Coding RNA Search

Ss1.1-rnmm10c_c4.5

Sequence:


               
               GTTAAAGTATAACTAAATCACTGTGTTTTCAGAATGGTGTTTAATGTTTCATAGCAACAG
ACCCGTGGTCAAACCAAAAACGTGGGTTGGAGTATATTTTTCATCTTCTAGGACCTTGGC
AGTTGCAAAAAAAGTGGGGGTGGGGGGATTTAATATAAGGATATAGAGATGAATTCAATG
TTTAACATTTTTATTTATTTAAATAGTTATTGACCTATGATGACTTCCTAGTCTTAACCT
TGTGTCTTTATTGTTATCATTCTTCCTTTCAAACACTTGGTTCTTGATAGAGTCACTGAT
TGCACAGAAGCGCTTCATGTTGACCCAGTTCCCAAGTAGCATTAATAATGGGGCCTGTGT
CATAAAATGCATGGATCATTAATAACTAAATGTCCCCGACACCTTTCACGACAGGGCTGG
GCTTAGTAAGTGACCACGTGGGGGGGGGTGGGGGGGAGGGCTGGGGGGAGGGCTCCATAG
AACATGGTAAAAAAAAAAGAAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTAAAGTATAACTAAATCACTGTGTTTTCAGAATGGTGTTTAATGTTTCATAGCAACAG
ACCCGTGGTCAAACCAAAAACGTGGGTTGGAGTATATTTTTCATCTTCTAGGACCTTGGC
AGTTGCAAAAAAAGTGGGGGTGGGGGGATTTAATATAAGGATATAGAGATGAATTCAATG
TTTAACATTTTTATTTATTTAAATAGTTATTGACCTATGATGACTTCCTAGTCTTAACCT
TGTGTCTTTATTGTTATCATTCTTCCTTTCAAACACTTGGTTCTTGATAGAGTCACTGAT
TGCACAGAAGCGCTTCATGTTGACCCAGTTCCCAAGTAGCATTAATAATGGGGCCTGTGT
CATAAAATGCATGGATCATTAATAACTAAATGTCCCCGACACCTTTCACGACAGGGCTGG
GCTTAGTAAGTGACCACGTGGGGGGGGGTGGGGGGGAGGGCTGGGGGGAGGGCTCCATAG
AACATGGTAAAAAAAAAAGAAGTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-462, gnl|bosTau2|chr5 (9902565-9903031)
               

               
               1-462, gnl|Hg17|chr12 (82030422-82030883)
               

               
               1-462, gnl|Mm7|chr10 (104649475-104649021)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-462, gnl|bosTau2|chr5 (9902565-9903031)
               

               
               1-462, gnl|Hg17|chr12 (82030422-82030883)
               

               
               1-462, gnl|Mm7|chr10 (104649475-104649021)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	1-462, gnl\|bosTau2\|chr5 (9902565-9903031)
	1-462, gnl\|Hg17\|chr12 (82030422-82030883)
	1-462, gnl\|Mm7\|chr10 (104649475-104649021)