Ss1.1-rnmm12c_j3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAATAATCTAACATTACAGAGGAATGGGAACGAGTATTCTCCCACTGAGATGAGAGAGAA CTCACCTGCCATCTCTCCTACCAACACCAGCACTGCTCTGTTTGGCCTGAAGCCTCGATC AGTGTTTCTAAGACCACAGAGAAATCTGGAATCTATAGATCCACAGTTTACGATTCGGAG AAAAATGGAACAGATGAGAGAAGAGAAGGAACTGGTGGAACAGCTGCGAGAGAGCATCGA GATGAGACTCAAGGTCAGCCTGCATGAAGACCTGGGGGCTGCCCTCATGGATGGGGTCGT CCTCTGCCATCTGGTCAACCACATCCGCCCACGATCCGTTGCAAGCATCCATGTCCCCTC ACCAGCAGTTCCTAAACTTAGCATGGCCAAATGCAGAAGAAACGTGGAAAACTTTTTGGA AGCATGCCGAAAATTAGGCGTACCAGAGGAAAAACTGTGTCTGCCCCATCACATCCTTGA AGAGAAAGGCCTGGTCAAAGTGGGCATTACGGTTCAAGCATTGCTAGACCTAGCTGTCAC CAAGGCTCTTTTCACATGAGACCAGCGGCTGTCCTTTGCGTCAGCTCAGATGCTTCTCCG ATCAGGGACCCTGGACTCCGCTCTCGGCACCCGTCCCCTCCGCCCTCCCACGTCCTGCTT GTCGGTTCCCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAATAATCTAACATTACAGAGGAATGGGAACGAGTATTCTCCCACTGAGATGAGAGAGAA CTCACCTGCCATCTCTCCTACCAACACCAGCACTGCTCTGTTTGGCCTGAAGCCTCGATC AGTGTTTCTAAGACCACAGAGAAATCTGGAATCTATAGATCCACAGTTTACGATTCGGAG AAAAATGGAACAGATGAGAGAAGAGAAGGAACTGGTGGAACAGCTGCGAGAGAGCATCGA GATGAGACTCAAGGTCAGCCTGCATGAAGACCTGGGGGCTGCCCTCATGGATGGGGTCGT CCTCTGCCATCTGGTCAACCACATCCGCCCACGATCCGTTGCAAGCATCCATGTCCCCTC ACCAGCAGTTCCTAAACTTAGCATGGCCAAATGCAGAAGAAACGTGGAAAACTTTTTGGA AGCATGCCGAAAATTAGGCGTACCAGAGGAAAAACTGTGTCTGCCCCATCACATCCTTGA AGAGAAAGGCCTGGTCAAAGTGGGCATTACGGTTCAAGCATTGCTAGACCTAGCTGTCAC CAAGGCTCTTTTCACATGAGACCAGCGGCTGTCCTTTGCGTCAGCTCAGATGCTTCTCCG ATCAGGGACCCTGGACTCCGCTCTCGGCACCCGTCCCCTCCGCCCTCCCACGTCCTGCTT GTCGGTTCCCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 231-369, gnl|bosTau2|chr12 (7353901-7354039) | |
| 231-369, gnl|canFam2|chr22 (7542291-7542130) | |
| 231-369, gnl|danRer3|chr9 (20552147-20551995) | |
| 231-369, gnl|dasNov1|scaffold_246452 (3299-3474) | |
| 231-369, gnl|echTel1|scaffold_159128 (2799-2638) | |
| 231-369, gnl|fr1|chrUn (230178324-230178478) | |
| 231-369, gnl|galGal2|chr1 (160451043-160451194) | |
| 231-369, gnl|hg17|chr13 (46200971-46201132) | |
| 231-369, gnl|Hg17|chr13 (46200981-46201119) | |
| 231-369, gnl|loxAfr1|scaffold_51240 (9596-9757) | |
| 231-369, gnl|mm7|chr14 (69467347-69467185) | |
| 231-369, gnl|Mm7|chr14 (69467334-69467196) | |
| 231-369, gnl|monDom2|scaffold_15 (60976085-60975924) | |
| 231-369, gnl|oryCun1|scaffold_211296 (24631-24787) | |
| 231-369, gnl|panTro1|chr14_random (12234584-12234745) | |
| 231-369, gnl|rheMac2|chr17 (25558131-25558292) | |
| 231-369, gnl|rn3|chr15 (55624556-55624394) | |
| 231-369, gnl|tetNig1|chr2 (6615018-6614862) | |
| 447-670, gnl|bosTau2|chr12 (7376603-7376824) | |
| 447-670, gnl|Hg17|chr13 (46222674-46222895) | |
| 447-670, gnl|Mm7|chr14 (69438849-69438628) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 231-369, gnl|bosTau2|chr12 (7353901-7354039) | |
| 231-369, gnl|canFam2|chr22 (7542291-7542130) | |
| 231-369, gnl|danRer3|chr9 (20552147-20551995) | |
| 231-369, gnl|dasNov1|scaffold_246452 (3299-3474) | |
| 231-369, gnl|echTel1|scaffold_159128 (2799-2638) | |
| 231-369, gnl|fr1|chrUn (230178324-230178478) | |
| 231-369, gnl|galGal2|chr1 (160451043-160451194) | |
| 231-369, gnl|hg17|chr13 (46200971-46201132) | |
| 231-369, gnl|Hg17|chr13 (46200981-46201119) | |
| 231-369, gnl|loxAfr1|scaffold_51240 (9596-9757) | |
| 231-369, gnl|mm7|chr14 (69467347-69467185) | |
| 231-369, gnl|Mm7|chr14 (69467334-69467196) | |
| 231-369, gnl|monDom2|scaffold_15 (60976085-60975924) | |
| 231-369, gnl|oryCun1|scaffold_211296 (24631-24787) | |
| 231-369, gnl|panTro1|chr14_random (12234584-12234745) | |
| 231-369, gnl|rheMac2|chr17 (25558131-25558292) | |
| 231-369, gnl|rn3|chr15 (55624556-55624394) | |
| 231-369, gnl|tetNig1|chr2 (6615018-6614862) | |
| 447-670, gnl|bosTau2|chr12 (7376603-7376824) | |
| 447-670, gnl|Hg17|chr13 (46222674-46222895) | |
| 447-670, gnl|Mm7|chr14 (69438849-69438628) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.245128) | |
| nmm (0.132802) | |
| eru (0.120048) |