Non-Coding RNA Search

Ss1.1-rnmm16c_o20.5

Sequence:


               
               GAGAGATGCTGGCGACGCAGCATCCCCTACAACGCAGAGCTGTCCCAGGATGAACCACCT
TGGAGGGACGGTGGTTGCACCTTGGGATCCCTTCTGGTGCCCTTAGTTCTCCCGGAAAGC
AAAGCAGAAGGCGACCAGAAGGACTCATCCACATCTTGCTACTCACAAGTGAGAAGGAAT
TTACTATCTGTCTCAAGAGCACTGATTATGAGCCAACTGCTGTCCTGTTTCACTTCCACT
TAAGCCTCACAGATAGCTATTGTGGAGCCCATGTTACTGAAGAGGAAAGAAGCACGGGTT
ATGTCACTTGCCCAGCAAGGTCACACAGCTGGAGGGAAGCAGGTTTTAAGCCCTGGGCTG
TCTAGCTTTATCACCCCACTACACCTGGCATCAGCTGGGCAGGGGATCTTTGCATCTCAT
TCGGAACTGAAACCCAGGAAGTTAAACTTGTCACCTCAACCACCAGGCCCACAGGAGTTC
GGCAATGAGGACTCCTCAACCAGTGCTCCTTCCACAAGTATGGGGGACCCCGTGACAAGT
CAGCAAAAAAAAATTCCTGGGCTCTGAGCCCCTCCCCTCTACGCCGGGCCAGCCGCCTGT
CATTTCCTGGGGCAGTGCTTTCCTGCCTTCCACCAATCCAAACCCAACCCCCAGCGAAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAGATGCTGGCGACGCAGCATCCCCTACAACGCAGAGCTGTCCCAGGATGAACCACCT
TGGAGGGACGGTGGTTGCACCTTGGGATCCCTTCTGGTGCCCTTAGTTCTCCCGGAAAGC
AAAGCAGAAGGCGACCAGAAGGACTCATCCACATCTTGCTACTCACAAGTGAGAAGGAAT
TTACTATCTGTCTCAAGAGCACTGATTATGAGCCAACTGCTGTCCTGTTTCACTTCCACT
TAAGCCTCACAGATAGCTATTGTGGAGCCCATGTTACTGAAGAGGAAAGAAGCACGGGTT
ATGTCACTTGCCCAGCAAGGTCACACAGCTGGAGGGAAGCAGGTTTTAAGCCCTGGGCTG
TCTAGCTTTATCACCCCACTACACCTGGCATCAGCTGGGCAGGGGATCTTTGCATCTCAT
TCGGAACTGAAACCCAGGAAGTTAAACTTGTCACCTCAACCACCAGGCCCACAGGAGTTC
GGCAATGAGGACTCCTCAACCAGTGCTCCTTCCACAAGTATGGGGGACCCCGTGACAAGT
CAGCAAAAAAAAATTCCTGGGCTCTGAGCCCCTCCCCTCTACGCCGGGCCAGCCGCCTGT
CATTTCCTGGGGCAGTGCTTTCCTGCCTTCCACCAATCCAAACCCAACCCCCAGCGAAGG

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               11-651, gnl|bosTau2|chr11 (78487994-78487342)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-651, gnl|bosTau2|chr11 (78487994-78487342)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nmm (0.132802)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)
               

               
               med (0.116252)