Ss1.1-rnmm19c_i20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGACACCAGGAGCAGGCCAGGCCGAAAGCGCTCCCACCGCGCCATGGGCTCTGACGTCT GGGTTGGCCCTTGGCGGCCGCACCGGCCCCGCGGCCCCATTGCAGCGCTCTACAGCGGCC CGGGGCCCAAGTACAAGCTGCCACCCAACACCGGCTACATCCTGCACGACCCGTCGCGGC CCCGCGCCCCCGCCTTCACCTTCGGCGCGCGCCTCCCCACGCAGCAGACTTCGTGCGGCC CCGGGCCAGGCTACCTGGTGCCTGCTCGCATGACCGTGCGCGGCCGCGACGGCGCCCCTG CCTACTCCATCTTCGGCCGCCCGCGCCACACAGCGCCCTTCCTCACTCCCGGACCGGGCA GGTACTTCCCGGAGCGAGCGGGGAACGTGGCGTACCCCAGCGCGCCCCGGCACACCATCG CTCCCCGAAACTGGGGCCTCCGCGCGGAGCCGCAGACCCCAGGCCCTGGGACCTACACTG TACCGTCTCTCCTGGGCCCGCGCGTCGTCGGTAAAGTCTCCGCCCCGACTTACTCCATCT ACGGCCGCAGCGCGGTGGGCAGCTTCTGCGAGGACCTCAGCAAGACCCCACGGCCCTGCG CCTACCACGTGGTGAACCCTGGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGACACCAGGAGCAGGCCAGGCCGAAAGCGCTCCCACCGCGCCATGGGCTCTGACGTCT GGGTTGGCCCTTGGCGGCCGCACCGGCCCCGCGGCCCCATTGCAGCGCTCTACAGCGGCC CGGGGCCCAAGTACAAGCTGCCACCCAACACCGGCTACATCCTGCACGACCCGTCGCGGC CCCGCGCCCCCGCCTTCACCTTCGGCGCGCGCCTCCCCACGCAGCAGACTTCGTGCGGCC CCGGGCCAGGCTACCTGGTGCCTGCTCGCATGACCGTGCGCGGCCGCGACGGCGCCCCTG CCTACTCCATCTTCGGCCGCCCGCGCCACACAGCGCCCTTCCTCACTCCCGGACCGGGCA GGTACTTCCCGGAGCGAGCGGGGAACGTGGCGTACCCCAGCGCGCCCCGGCACACCATCG CTCCCCGAAACTGGGGCCTCCGCGCGGAGCCGCAGACCCCAGGCCCTGGGACCTACACTG TACCGTCTCTCCTGGGCCCGCGCGTCGTCGGTAAAGTCTCCGCCCCGACTTACTCCATCT ACGGCCGCAGCGCGGTGGGCAGCTTCTGCGAGGACCTCAGCAAGACCCCACGGCCCTGCG CCTACCACGTGGTGAACCCTGGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 21-419, gnl|bosTau2|chr5 (75761029-75761409) | |
| 21-419, gnl|Hg17|chr22 (49260676-49260189) | |
| 21-419, gnl|Mm7|chr15 (89462081-89461570) | |
| 114-365, gnl|bosTau2|chr5 (75761214-75761464) | |
| 114-365, gnl|Hg17|chr22 (49260430-49260133) | |
| 114-365, gnl|Mm7|chr15 (89461783-89461515) | |
| 457-584, gnl|bosTau2|chr5 (75761913-75762040) | |
| 457-584, gnl|canFam2|chr10 (19772863-19772723) | |
| 457-584, gnl|danRer3|chr19 (60530000-60529859) | |
| 457-584, gnl|dasNov1|scaffold_170445 (3639-3773) | |
| 457-584, gnl|echTel1|scaffold_292363 (39398-39530) | |
| 457-584, gnl|hg17|chr22 (49259508-49259649) | |
| 457-584, gnl|Hg17|chr22 (49259637-49259510) | |
| 457-584, gnl|loxAfr1|scaffold_151490 (3836-3982) | |
| 457-584, gnl|mm7|chr15 (89460976-89461109) | |
| 457-584, gnl|Mm7|chr15 (89461105-89460978) | |
| 457-584, gnl|monDom2|scaffold_119 (1084787-1084933) | |
| 457-584, gnl|oryCun1|scaffold_158469 (12095-12236) | |
| 457-584, gnl|panTro1|chr23 (49750320-49750461) | |
| 457-584, gnl|rheMac2|chr10 (94552820-94552961) | |
| 457-584, gnl|rn3|chr7 (127706847-127706980) | |
| 457-584, gnl|xenTro1|scaffold_2630 (22300-22453) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-419, gnl|bosTau2|chr5 (75761029-75761409) | |
| 21-419, gnl|Hg17|chr22 (49260676-49260189) | |
| 21-419, gnl|Mm7|chr15 (89462081-89461570) | |
| 114-365, gnl|bosTau2|chr5 (75761214-75761464) | |
| 114-365, gnl|Hg17|chr22 (49260430-49260133) | |
| 114-365, gnl|Mm7|chr15 (89461783-89461515) | |
| 457-584, gnl|bosTau2|chr5 (75761913-75762040) | |
| 457-584, gnl|canFam2|chr10 (19772863-19772723) | |
| 457-584, gnl|danRer3|chr19 (60530000-60529859) | |
| 457-584, gnl|dasNov1|scaffold_170445 (3639-3773) | |
| 457-584, gnl|echTel1|scaffold_292363 (39398-39530) | |
| 457-584, gnl|hg17|chr22 (49259508-49259649) | |
| 457-584, gnl|Hg17|chr22 (49259637-49259510) | |
| 457-584, gnl|loxAfr1|scaffold_151490 (3836-3982) | |
| 457-584, gnl|mm7|chr15 (89460976-89461109) | |
| 457-584, gnl|Mm7|chr15 (89461105-89460978) | |
| 457-584, gnl|monDom2|scaffold_119 (1084787-1084933) | |
| 457-584, gnl|oryCun1|scaffold_158469 (12095-12236) | |
| 457-584, gnl|panTro1|chr23 (49750320-49750461) | |
| 457-584, gnl|rheMac2|chr10 (94552820-94552961) | |
| 457-584, gnl|rn3|chr7 (127706847-127706980) | |
| 457-584, gnl|xenTro1|scaffold_2630 (22300-22453) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fhi (0.169578) | |
| nmm (0.132802) |