Non-Coding RNA Search

Ss1.1-rnmm19c_k16.5

Sequence:


               
               TGAAGCCACTGCACGAGACCCTGAGAGCAACCTCAGGACGCAGGGACCATGAAGAGCCTG
CTCCTTCTCTCCGTCCTGGCTGCCTTGGCCGTGGCAGCCCTGTGCTATGAATCTCATGAG
AGCTTGGAATCCTATGAAATCAGTAAGTAAATATGTGACTTCCTTATTTAAATCTCAAAT
ATTAAAGAATCTCTCCCAATTCTCAAAGAGACAAAATGACAATGCCTATACCAGGGAGGG
AAAAGAGGGTCTCCTTTGGGAAATGAAAATAAATTTTAAAATTCTTTTTAAAAAATGTTT
TATTAAAGAAGAGTTGCTTTACAATGTTGTATCAATTTCGGCTGCCCAGCAAAGTGACTC
AGAGATATATATCTATATATTCTTTTTCTCATATTATCTTTCATCATATTCTATCACGAG
AGACTGGGTATAGCACCCTGTGCTCTGCAGTAGGGCCTCATTGCTTATCCATTCTAAATG
TGATAGTTTACATCTACTAACCCCAAGCTCCCAGTCCATCCCACTCCCTTAGGGCTAAAA
AAATCACCAGATGAGCAATTTTTTAAGTTTGAAATGGTGTAAGATGACAAGTATGCTCTC
AACATACTTAGGAACCATAAAACCTCATCTGGAAATTTTAAGTTGACACCACATCAACCA
CACAGATGGAAAATGAGGAGTAAGGACAAATGACCAAGGACATATTGAAGGCCAAGTCAG
CTGGGAGACCACAGACATCAACAGTCTGTTGGATCCTAGCAAATATCTGAACTTACAATG
ACTGAGCAGAGGAGGAAATAACACATCATTCGCATCTTTCATTTGTTCATTATTTTTATG
ACGTTTAAACCATTTCATTCACTGGAAATCTTAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAAGCCACTGCACGAGACCCTGAGAGCAACCTCAGGACGCAGGGACCATGAAGAGCCTG
CTCCTTCTCTCCGTCCTGGCTGCCTTGGCCGTGGCAGCCCTGTGCTATGAATCTCATGAG
AGCTTGGAATCCTATGAAATCAGTAAGTAAATATGTGACTTCCTTATTTAAATCTCAAAT
ATTAAAGAATCTCTCCCAATTCTCAAAGAGACAAAATGACAATGCCTATACCAGGGAGGG
AAAAGAGGGTCTCCTTTGGGAAATGAAAATAAATTTTAAAATTCTTTTTAAAAAATGTTT
TATTAAAGAAGAGTTGCTTTACAATGTTGTATCAATTTCGGCTGCCCAGCAAAGTGACTC
AGAGATATATATCTATATATTCTTTTTCTCATATTATCTTTCATCATATTCTATCACGAG
AGACTGGGTATAGCACCCTGTGCTCTGCAGTAGGGCCTCATTGCTTATCCATTCTAAATG
TGATAGTTTACATCTACTAACCCCAAGCTCCCAGTCCATCCCACTCCCTTAGGGCTAAAA
AAATCACCAGATGAGCAATTTTTTAAGTTTGAAATGGTGTAAGATGACAAGTATGCTCTC
AACATACTTAGGAACCATAAAACCTCATCTGGAAATTTTAAGTTGACACCACATCAACCA
CACAGATGGAAAATGAGGAGTAAGGACAAATGACCAAGGACATATTGAAGGCCAAGTCAG
CTGGGAGACCACAGACATCAACAGTCTGTTGGATCCTAGCAAATATCTGAACTTACAATG
ACTGAGCAGAGGAGGAAATAACACATCATTCGCATCTTTCATTTGTTCATTATTTTTATG
ACGTTTAAACCATTTCATTCACTGGAAATCTTAAAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               277-530, gnl|bosTau2|chr12 (15089698-15089446)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               277-530, gnl|bosTau2|chr12 (15089698-15089446)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cki (0.165235)
               

               
               che (0.136314)
               

               
               nmm (0.132802)
               

               
               jca (0.11396)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)
               

               
               che (0.136314)
               

               
               nmm (0.132802)
               

               
               jca (0.11396)