Ss1.1-rnmm20c_m19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGGCGGGCTGCCTCGCGCCGGAGGTAGAGTGAGTGTGCTTTATGGACCATGTGCTGCT ATGTATGCCCAAAGTACTTGAAATGCAAATTTGGAGAGACTTTGCCGTCTAAATGCTTGG CTGGATTAAACGCCTAATTAGGATGGTTTTTCAACAGGTTGGAAACATGCAGTCGGTACT TTGGTCTGGGAAGCCATATGGTTCATCTCGAAGTATCGTAAGGAAAATTGGTACTAATTT ATCTCTGATCCAGTGTCCAAGAGTTCAATTTCAGCTTACCAGCCCTACAACCGAATGGAG CCCCAGCAATCCAGAAGAGGATGCAGTGGTGTCTTTTGCTGATATCGGATGGGTAGCCAA AGAAGATGGAGAGTGTTCAACAAGACGAAGGGCGGAGGTCAGGTCAAGGCAGCCCCTTCA GGATGAACTTCCCTTCTTTGAGCAGCCCCCAAGCAGGCAGTTTTCCTTCCCAAGCCTGTC TCCAGAAGAGCCTCAGCTGCAGACCACGATACTGGCCAACGAGGAAGCACTGCAGAAGAT CTGTGCCCTTGAGAGTGAACTTGCTGCTCTCAGAGCTCAGATCGCTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGGCGGGCTGCCTCGCGCCGGAGGTAGAGTGAGTGTGCTTTATGGACCATGTGCTGCT ATGTATGCCCAAAGTACTTGAAATGCAAATTTGGAGAGACTTTGCCGTCTAAATGCTTGG CTGGATTAAACGCCTAATTAGGATGGTTTTTCAACAGGTTGGAAACATGCAGTCGGTACT TTGGTCTGGGAAGCCATATGGTTCATCTCGAAGTATCGTAAGGAAAATTGGTACTAATTT ATCTCTGATCCAGTGTCCAAGAGTTCAATTTCAGCTTACCAGCCCTACAACCGAATGGAG CCCCAGCAATCCAGAAGAGGATGCAGTGGTGTCTTTTGCTGATATCGGATGGGTAGCCAA AGAAGATGGAGAGTGTTCAACAAGACGAAGGGCGGAGGTCAGGTCAAGGCAGCCCCTTCA GGATGAACTTCCCTTCTTTGAGCAGCCCCCAAGCAGGCAGTTTTCCTTCCCAAGCCTGTC TCCAGAAGAGCCTCAGCTGCAGACCACGATACTGGCCAACGAGGAAGCACTGCAGAAGAT CTGTGCCCTTGAGAGTGAACTTGCTGCTCTCAGAGCTCAGATCGCTAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 38-177, gnl|bosTau2|chr18 (109472-109333) | |
| 38-177, gnl|canFam2|chr29 (18355325-18355475) | |
| 38-177, gnl|danRer3|chrNA (97519098-97519249) | |
| 38-177, gnl|dasNov1|scaffold_36261 (6202-6052) | |
| 38-177, gnl|echTel1|scaffold_84347 (86-236) | |
| 38-177, gnl|hg17|chr8 (66744657-66744810) | |
| 38-177, gnl|Hg17|chr8 (66744664-66744809) | |
| 38-177, gnl|loxAfr1|scaffold_67695 (5799-5949) | |
| 38-177, gnl|mm7|chr3 (18932039-18932188) | |
| 38-177, gnl|Mm7|chr3 (18932046-18932187) | |
| 38-177, gnl|monDom2|scaffold_4 (96088170-96088021) | |
| 38-177, gnl|oryCun1|scaffold_146865 (9309-9459) | |
| 38-177, gnl|panTro1|chr7 (68742368-68742521) | |
| 38-177, gnl|rheMac2|chrX (64999259-64999123) | |
| 38-177, gnl|rn3|chr2 (104259953-104260102) | |
| 269-391, gnl|bosTau2|chr18 (95186-95064) | |
| 269-391, gnl|Hg17|chr8 (66768427-66768549) | |
| 269-391, gnl|Mm7|chr3 (18943480-18943602) | |
| 395-588, gnl|bosTau2|chr18 (70390-70197) | |
| 395-588, gnl|Hg17|chr8 (66779487-66779680) | |
| 395-588, gnl|Mm7|chr3 (18947493-18947683) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 38-177, gnl|bosTau2|chr18 (109472-109333) | |
| 38-177, gnl|canFam2|chr29 (18355325-18355475) | |
| 38-177, gnl|danRer3|chrNA (97519098-97519249) | |
| 38-177, gnl|dasNov1|scaffold_36261 (6202-6052) | |
| 38-177, gnl|echTel1|scaffold_84347 (86-236) | |
| 38-177, gnl|hg17|chr8 (66744657-66744810) | |
| 38-177, gnl|Hg17|chr8 (66744664-66744809) | |
| 38-177, gnl|loxAfr1|scaffold_67695 (5799-5949) | |
| 38-177, gnl|mm7|chr3 (18932039-18932188) | |
| 38-177, gnl|Mm7|chr3 (18932046-18932187) | |
| 38-177, gnl|monDom2|scaffold_4 (96088170-96088021) | |
| 38-177, gnl|oryCun1|scaffold_146865 (9309-9459) | |
| 38-177, gnl|panTro1|chr7 (68742368-68742521) | |
| 38-177, gnl|rheMac2|chrX (64999259-64999123) | |
| 38-177, gnl|rn3|chr2 (104259953-104260102) | |
| 269-391, gnl|bosTau2|chr18 (95186-95064) | |
| 269-391, gnl|Hg17|chr8 (66768427-66768549) | |
| 269-391, gnl|Mm7|chr3 (18943480-18943602) | |
| 395-588, gnl|bosTau2|chr18 (70390-70197) | |
| 395-588, gnl|Hg17|chr8 (66779487-66779680) | |
| 395-588, gnl|Mm7|chr3 (18947493-18947683) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.229595) | |
| nje (0.16592) | |
| nmm (0.132802) |