Ss1.1-rnmm20c_m4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTCTGGTTTAAGCTGTACATTTACCACATCACCAGGTAGGGACCACCTTCTCTTTTACT GTCCAAAGGTACAAGACTTCGAAAACTGCCAGACATATTCCAGGGTTACGATCGATTACT AATAACGTCGTGGGGTCATGATCCTGGGGTGGTTCCTACATCGAATGTGCTCACAATGTT GAATGATGCTTTAACACATTCGGCCGTTCTGATTCAGGGGCATGGTCTGCATGGGATAGG AGAGACTGTCCACATACCTTTCCCATTTGATGAGACAGAACTCCAAGGAGAGTTTACTCG TGTCAATATGGGTGTCCATAAAGCACTGCAAATACTAAGGAGCAAAGTGGACTTGCAGCA TTTTTGTGGATATGTCACCATGTTGAATGCTTCCAGCCAGCTTGCAAACAGAAAACTCAG TGATGCTTCTGATGAGAGAGGAGAACCTGATTTGGCTTCTGGCTCAGATGTAAATGGGAG TACGGAGTCATTTGAAATGGTCATTGAGGAAGCAGCTGTAGATTCAGCCACAAAGCAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTCTGGTTTAAGCTGTACATTTACCACATCACCAGGTAGGGACCACCTTCTCTTTTACT GTCCAAAGGTACAAGACTTCGAAAACTGCCAGACATATTCCAGGGTTACGATCGATTACT AATAACGTCGTGGGGTCATGATCCTGGGGTGGTTCCTACATCGAATGTGCTCACAATGTT GAATGATGCTTTAACACATTCGGCCGTTCTGATTCAGGGGCATGGTCTGCATGGGATAGG AGAGACTGTCCACATACCTTTCCCATTTGATGAGACAGAACTCCAAGGAGAGTTTACTCG TGTCAATATGGGTGTCCATAAAGCACTGCAAATACTAAGGAGCAAAGTGGACTTGCAGCA TTTTTGTGGATATGTCACCATGTTGAATGCTTCCAGCCAGCTTGCAAACAGAAAACTCAG TGATGCTTCTGATGAGAGAGGAGAACCTGATTTGGCTTCTGGCTCAGATGTAAATGGGAG TACGGAGTCATTTGAAATGGTCATTGAGGAAGCAGCTGTAGATTCAGCCACAAAGCAAAA |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-104, gnl|bosTau2|chr17 (7353061-7352958) | |
| 1-104, gnl|canFam2|chr13 (25100516-25100686) | |
| 1-104, gnl|danRer3|chr19 (49532602-49532770) | |
| 1-104, gnl|dasNov1|scaffold_79 (275664-275834) | |
| 1-104, gnl|echTel1|scaffold_262575 (6748-6578) | |
| 1-104, gnl|fr1|chrUn (182659815-182659981) | |
| 1-104, gnl|galGal2|chr2 (145623782-145623617) | |
| 1-104, gnl|hg17|chr8 (124880922-124881091) | |
| 1-104, gnl|Hg17|chr8 (124880973-124881076) | |
| 1-104, gnl|loxAfr1|scaffold_888 (69946-70117) | |
| 1-104, gnl|mm7|chr15 (58508150-58508318) | |
| 1-104, gnl|Mm7|chr15 (58508200-58508303) | |
| 1-104, gnl|monDom2|scaffold_3 (30812280-30812110) | |
| 1-104, gnl|oryCun1|scaffold_201327 (108775-108929) | |
| 1-104, gnl|panTro1|chr7 (127615770-127615939) | |
| 1-104, gnl|rheMac2|chr8 (126376106-126376275) | |
| 1-104, gnl|rn3|chr7 (95216530-95216698) | |
| 1-104, gnl|tetNig1|chr21 (1830223-1830083) | |
| 1-104, gnl|xenTro1|scaffold_890 (365341-365528) | |
| 256-537, gnl|bosTau2|chr15 (33938403-33938119) | |
| 256-537, gnl|Hg17|chr11 (73384306-73384030) | |
| 256-537, gnl|Mm7|chr15 (58513677-58515363) | |
| 289-441, gnl|bosTau2|chr17 (7347094-7346942) | |
| 289-441, gnl|canFam2|chr13 (25107023-25107131) | |
| 289-441, gnl|danRer3|chr19 (49536507-49536614) | |
| 289-441, gnl|dasNov1|scaffold_28482 (417-316) | |
| 289-441, gnl|echTel1|scaffold_94894 (653-554) | |
| 289-441, gnl|fr1|chrUn (182661438-182661545) | |
| 289-441, gnl|hg17|chr1 (145023596-145023702) | |
| 289-441, gnl|Hg17|chr8 (124887499-124887651) | |
| 289-441, gnl|loxAfr1|scaffold_9918 (41615-41752) | |
| 289-441, gnl|mm7|chr15 (58513678-58513786) | |
| 289-441, gnl|Mm7|chr15 (58513677-58513829) | |
| 289-441, gnl|monDom2|scaffold_3 (30809431-30809323) | |
| 289-441, gnl|oryCun1|scaffold_97311 (4123-4231) | |
| 289-441, gnl|panTro1|chr1 (127909206-127909314) | |
| 289-441, gnl|rheMac2|chr1 (127923448-127923545) | |
| 289-441, gnl|rn3|chr7 (95219026-95219134) | |
| 289-441, gnl|xenTro1|scaffold_890 (366490-366598) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-104, gnl|bosTau2|chr17 (7353061-7352958) | |
| 1-104, gnl|canFam2|chr13 (25100516-25100686) | |
| 1-104, gnl|danRer3|chr19 (49532602-49532770) | |
| 1-104, gnl|dasNov1|scaffold_79 (275664-275834) | |
| 1-104, gnl|echTel1|scaffold_262575 (6748-6578) | |
| 1-104, gnl|fr1|chrUn (182659815-182659981) | |
| 1-104, gnl|galGal2|chr2 (145623782-145623617) | |
| 1-104, gnl|hg17|chr8 (124880922-124881091) | |
| 1-104, gnl|Hg17|chr8 (124880973-124881076) | |
| 1-104, gnl|loxAfr1|scaffold_888 (69946-70117) | |
| 1-104, gnl|mm7|chr15 (58508150-58508318) | |
| 1-104, gnl|Mm7|chr15 (58508200-58508303) | |
| 1-104, gnl|monDom2|scaffold_3 (30812280-30812110) | |
| 1-104, gnl|oryCun1|scaffold_201327 (108775-108929) | |
| 1-104, gnl|panTro1|chr7 (127615770-127615939) | |
| 1-104, gnl|rheMac2|chr8 (126376106-126376275) | |
| 1-104, gnl|rn3|chr7 (95216530-95216698) | |
| 1-104, gnl|tetNig1|chr21 (1830223-1830083) | |
| 1-104, gnl|xenTro1|scaffold_890 (365341-365528) | |
| 256-537, gnl|bosTau2|chr15 (33938403-33938119) | |
| 256-537, gnl|Hg17|chr11 (73384306-73384030) | |
| 256-537, gnl|Mm7|chr15 (58513677-58515363) | |
| 289-441, gnl|bosTau2|chr17 (7347094-7346942) | |
| 289-441, gnl|canFam2|chr13 (25107023-25107131) | |
| 289-441, gnl|danRer3|chr19 (49536507-49536614) | |
| 289-441, gnl|dasNov1|scaffold_28482 (417-316) | |
| 289-441, gnl|echTel1|scaffold_94894 (653-554) | |
| 289-441, gnl|fr1|chrUn (182661438-182661545) | |
| 289-441, gnl|hg17|chr1 (145023596-145023702) | |
| 289-441, gnl|Hg17|chr8 (124887499-124887651) | |
| 289-441, gnl|loxAfr1|scaffold_9918 (41615-41752) | |
| 289-441, gnl|mm7|chr15 (58513678-58513786) | |
| 289-441, gnl|Mm7|chr15 (58513677-58513829) | |
| 289-441, gnl|monDom2|scaffold_3 (30809431-30809323) | |
| 289-441, gnl|oryCun1|scaffold_97311 (4123-4231) | |
| 289-441, gnl|panTro1|chr1 (127909206-127909314) | |
| 289-441, gnl|rheMac2|chr1 (127923448-127923545) | |
| 289-441, gnl|rn3|chr7 (95219026-95219134) | |
| 289-441, gnl|xenTro1|scaffold_890 (366490-366598) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| gul (0.177588) | |
| ill (0.175593) | |
| nmm (0.132802) | |
| jej (0.0989218) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| gul (0.177588) | |
| ill (0.175593) | |
| nmm (0.132802) | |
| jej (0.0989218) |