Non-Coding RNA Search

Ss1.1-rnmm20c_m8.5

Sequence:


               
               CTTAAACAGAAAAGGGACAAGCTCATGTGTTTGATTGCAGTCTTAAATTGTTACTAAAAG
TTAACTTCAATAGCTTATACAGTTAGAGGATGAATTATCTTTAAGTCAGTTGAGAAAATT
TCTTCATACTGATGAGAATTGCAGCTTACTCTTGTTTTTTGTTTTTGT------------
------------------------------------------------------------
------------ACAGCCATAGCAACAGCAGTGCAGGAACCAAGCCTCCTCTACCCCTAC
ACCCCAGCTCACAACAGTGCCAGATTCGTAACCTGCTGAGCCATAACAGGAGCTGCATAA
GCTTACTCTTAATTTAGGCAGTTTACTTCTGTGGGTCATTTTAGCAGCCCCACAAATGAA
TGGCGTGCGGGGCGAGACCCTTTGCAGCAGAAGAGGTGGGTGCTGGGTGTGCAGTCCCTG
CTCTCTGGCGCCCTCTCTTGGGGGAAGTGAGCCTGATCACAGCTTTGTTTACACACAGGT
GCTTTGCTTTTAGAGTGATCCACACCCGAATTGCAGCAGAAACAGAAAAATGGAAAGTGT
CACCCAGAGGTGACTGCGTATTTTTATTTTGTCTTCGTAGCTAGCTTTTTTCACATGATT
TTGCATTCTAAATTGTAACTTCTAAATTTCAGGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTAAACAGAAAAGGGACAAGCTCATGTGTTTGATTGCAGTCTTAAATTGTTACTAAAAG
TTAACTTCAATAGCTTATACAGTTAGAGGATGAATTATCTTTAAGTCAGTTGAGAAAATT
TCTTCATACTGATGAGAATTGCAGCTTACTCTTGTTTTTTGTTTTTGT------------
------------------------------------------------------------
------------ACAGCCATAGCAACAGCAGTGCAGGAACCAAGCCTCCTCTACCCCTAC
ACCCCAGCTCACAACAGTGCCAGATTCGTAACCTGCTGAGCCATAACAGGAGCTGCATAA
GCTTACTCTTAATTTAGGCAGTTTACTTCTGTGGGTCATTTTAGCAGCCCCACAAATGAA
TGGCGTGCGGGGCGAGACCCTTTGCAGCAGAAGAGGTGGGTGCTGGGTGTGCAGTCCCTG
CTCTCTGGCGCCCTCTCTTGGGGGAAGTGAGCCTGATCACAGCTTTGTTTACACACAGGT
GCTTTGCTTTTAGAGTGATCCACACCCGAATTGCAGCAGAAACAGAAAAATGGAAAGTGT
CACCCAGAGGTGACTGCGTATTTTTATTTTGTCTTCGTAGCTAGCTTTTTTCACATGATT
TTGCATTCTAAATTGTAACTTCTAAATTTCAGGTTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               276-612, gnl|bosTau2|chr25 (29897742-29898080)
               

               
               276-612, gnl|Hg17|chr7 (73053005-73053332)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               276-612, gnl|bosTau2|chr25 (29897742-29898080)
               

               
               276-612, gnl|Hg17|chr7 (73053005-73053332)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nmm (0.132802)
               

               
               ese (0.126502)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)
               

               
               ese (0.126502)

	276-612, gnl\|bosTau2\|chr25 (29897742-29898080)
	276-612, gnl\|Hg17\|chr7 (73053005-73053332)