Non-Coding RNA Search

Ss1.1-rnmm21c_l20.5

Sequence:


               
               CAGCCCACGGATCCGCGGTGGAGAACACGAGCACCGCTCGGCTCGCTTGCAAGCTCCAGG
GTAGGGCACCCAGGCCTGTCAAGGACCGCCGAGCAAGCGTCGCCGGGACAGCTGGCCCCG
CAGAAATAATTGGTAACAAGACCTCCGTAGCCATGGCTAGTTCTGACGTGAAACCAAAAT
CCATAAGTCGTGCCAAAAAATGGTCAGAAGAGATAGAAAATCTGTACAGATTTCAACAAG
CAGGATATCGAGATGAAATTGAATATAAACAAGTGAAACAAGTTTCTGTGGTAGATCGTT
GGCCAGAGACAGGATATGTGAAGAAACTTCAGAGAAGGGACAATACTTTCTATTACTACA
ACAAACAGAGGGAATGTGATGACAAGGAAGTCCACAAAGTGAAAATTTATGCTTACTAGC
CTTCCTGATATTTCCTGTCATTATCTTTTAAAAATCCATTGTTTCATTCTGCATCATGTA
AGTGACTGTCATTGTACAAAATTCCCCAAAATGCAGACTCTGATGGCATGTTTTGAAACA
CCAAAGCCATGAAGCTTGGTCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCCCACGGATCCGCGGTGGAGAACACGAGCACCGCTCGGCTCGCTTGCAAGCTCCAGG
GTAGGGCACCCAGGCCTGTCAAGGACCGCCGAGCAAGCGTCGCCGGGACAGCTGGCCCCG
CAGAAATAATTGGTAACAAGACCTCCGTAGCCATGGCTAGTTCTGACGTGAAACCAAAAT
CCATAAGTCGTGCCAAAAAATGGTCAGAAGAGATAGAAAATCTGTACAGATTTCAACAAG
CAGGATATCGAGATGAAATTGAATATAAACAAGTGAAACAAGTTTCTGTGGTAGATCGTT
GGCCAGAGACAGGATATGTGAAGAAACTTCAGAGAAGGGACAATACTTTCTATTACTACA
ACAAACAGAGGGAATGTGATGACAAGGAAGTCCACAAAGTGAAAATTTATGCTTACTAGC
CTTCCTGATATTTCCTGTCATTATCTTTTAAAAATCCATTGTTTCATTCTGCATCATGTA
AGTGACTGTCATTGTACAAAATTCCCCAAAATGCAGACTCTGATGGCATGTTTTGAAACA
CCAAAGCCATGAAGCTTGGTCTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57162397|emb|CAI40026.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57162397|emb|CAI40026.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               290-545, gnl|bosTau2|chr13 (17298788-17298531)
               

               
               290-545, gnl|Hg17|chr10 (15054517-15054774)
               

               
               290-545, gnl|Mm7|chr2 (3326596-3326323)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               290-545, gnl|bosTau2|chr13 (17298788-17298531)
               

               
               290-545, gnl|Hg17|chr10 (15054517-15054774)
               

               
               290-545, gnl|Mm7|chr2 (3326596-3326323)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tes (1.03907)
               

               
               cte (0.29274)
               

               
               nmm (0.132802)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (1.03907)
               

               
               cte (0.29274)
               

               
               nmm (0.132802)

	290-545, gnl\|bosTau2\|chr13 (17298788-17298531)
	290-545, gnl\|Hg17\|chr10 (15054517-15054774)
	290-545, gnl\|Mm7\|chr2 (3326596-3326323)