Ss1.1-rnmm21c_m16.5
|
TGAACATGGTCTTGTGGATGAGCAGCAGAAAGTACGGACCATTAGTGCTTTGGCCATTGC
TGCCTTGGCTGAAGCAGCAACTCCTTATGGTATCGAGTCTTTTGATTCTGTGTTAAAGCC
TCTATGGAAAGGTATACGCCAACACAGAGGAAAGGGTCTGGCTGCATTCTTAAAGGCTAT
TGGGTATCTTATTCCCCTCATGGATGCAGAATATGCCAACTACTATACCAGAGAAGTGAT
GTTAATTCTTATTCGAGAATTCCAATCTCCTGATGAAGAAATGAAGAAAATTGTGCTGAA
GGTGGTAAAGCAGTGTTGTGGAACAGATGGTGTAGAAGCAAACTACATTAAAACAGAGAT
CCTCCCTCCCTTTTTTAAACACTTCTGGCAACATAGAATGGCTTTGGATAGAAGAAATTA
CCGACAGTTAGTTGATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGAAATTAT
ATCCAGGATTGTGGATGATCTGAAAGATGAAGCTGAACAGTACAGAAAAATGGTCATGGA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGAACATGGTCTTGTGGATGAGCAGCAGAAAGTACGGACCATTAGTGCTTTGGCCATTGC
TGCCTTGGCTGAAGCAGCAACTCCTTATGGTATCGAGTCTTTTGATTCTGTGTTAAAGCC
TCTATGGAAAGGTATACGCCAACACAGAGGAAAGGGTCTGGCTGCATTCTTAAAGGCTAT
TGGGTATCTTATTCCCCTCATGGATGCAGAATATGCCAACTACTATACCAGAGAAGTGAT
GTTAATTCTTATTCGAGAATTCCAATCTCCTGATGAAGAAATGAAGAAAATTGTGCTGAA
GGTGGTAAAGCAGTGTTGTGGAACAGATGGTGTAGAAGCAAACTACATTAAAACAGAGAT
CCTCCCTCCCTTTTTTAAACACTTCTGGCAACATAGAATGGCTTTGGATAGAAGAAATTA
CCGACAGTTAGTTGATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGAAATTAT
ATCCAGGATTGTGGATGATCTGAAAGATGAAGCTGAACAGTACAGAAAAATGGTCATGGA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
21-110, + strand, RNAmicro p=0.999501 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
21-110, + strand, RNAmicro p=0.999501 |
|
8-155, gnl|bosTau2|chr2 (50630158-50630011) |
|
8-155, gnl|canFam2|chr37 (9933350-9933509) |
|
8-155, gnl|dasNov1|scaffold_216707 (1266-1426) |
|
8-155, gnl|echTel1|scaffold_293573 (78926-78767) |
|
8-155, gnl|fr1|chrUn (268470447-268470288) |
|
8-155, gnl|galGal2|chr7 (11031981-11032140) |
|
8-155, gnl|hg17|chr2 (198092210-198092369) |
|
8-155, gnl|Hg17|chr2 (198092361-198092214) |
|
8-155, gnl|loxAfr1|scaffold_26479 (722-563) |
|
8-155, gnl|mm7|chr1 (55247549-55247708) |
|
8-155, gnl|Mm7|chr1 (55247700-55247553) |
|
8-155, gnl|monDom2|scaffold_2 (107072560-107072719) |
|
8-155, gnl|oryCun1|scaffold_193724 (21183-21342) |
|
8-155, gnl|panTro1|chr13 (88044570-88044729) |
|
8-155, gnl|rheMac2|chr12 (61013821-61013980) |
|
8-155, gnl|rn3|chr9 (53811709-53811868) |
|
8-155, gnl|xenTro1|scaffold_48 (2860718-2860562) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
8-155, gnl|bosTau2|chr2 (50630158-50630011) |
|
8-155, gnl|canFam2|chr37 (9933350-9933509) |
|
8-155, gnl|dasNov1|scaffold_216707 (1266-1426) |
|
8-155, gnl|echTel1|scaffold_293573 (78926-78767) |
|
8-155, gnl|fr1|chrUn (268470447-268470288) |
|
8-155, gnl|galGal2|chr7 (11031981-11032140) |
|
8-155, gnl|hg17|chr2 (198092210-198092369) |
|
8-155, gnl|Hg17|chr2 (198092361-198092214) |
|
8-155, gnl|loxAfr1|scaffold_26479 (722-563) |
|
8-155, gnl|mm7|chr1 (55247549-55247708) |
|
8-155, gnl|Mm7|chr1 (55247700-55247553) |
|
8-155, gnl|monDom2|scaffold_2 (107072560-107072719) |
|
8-155, gnl|oryCun1|scaffold_193724 (21183-21342) |
|
8-155, gnl|panTro1|chr13 (88044570-88044729) |
|
8-155, gnl|rheMac2|chr12 (61013821-61013980) |
|
8-155, gnl|rn3|chr9 (53811709-53811868) |
|
8-155, gnl|xenTro1|scaffold_48 (2860718-2860562) |
|
nmm (0.132802) |
|
pgl (0.118483) |
|
nmm (0.132802) |
|
pgl (0.118483) |
