Non-Coding RNA Search

Ss1.1-rnmm22c_c14.5

Sequence:


               
               AAAGGTCTGAACACTGTTAAGGAGAAAGCTGAGTATTTACTTGCCTTTCTGATGAACATA
AAAATGTGTTTTTTATGCCAGTTTTATTGTTGAAAATACATACCCCCTTAAAAAAATTTT
TTTTAAATGTATTGTGGCTTTCAATTACCAGATTGTCCAGGTAATGACAGTAAATTGACG
TGAAGTAATAGTTGTGATATAATGACCAATAGATGCCAAACAGCTTGTGGCCACACTCAT
GATGGGGTCACTTAATCCCTCTGTAGCAGCTGTCAAGGGGTGGCAGGCACAAAAAGAGTG
ACCTTAGAAATAAGAGTTCTTCAAAAGGCACATGCCTGTGAGGGATACAATGTGATTTTA
AATTTTAATGCAAAACTCTACTTTCTGTTTATTTTTTTATCATTTAAACTGATAAGCACT
TTTTGTGTCAATATAAAATGTTCTAAAACCGAAGAAATGCTAAGACACCTGTCTTGTGAA
GGAAGACACATGTGTCTCTCCTGACGAGTGGATTCTCCTAGGATCAGAAGAAACTGAGGC
ATAGTGTCATGTGCTCAGTAGTTGCCAAAGTCTACCAACTTTGGGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGGTCTGAACACTGTTAAGGAGAAAGCTGAGTATTTACTTGCCTTTCTGATGAACATA
AAAATGTGTTTTTTATGCCAGTTTTATTGTTGAAAATACATACCCCCTTAAAAAAATTTT
TTTTAAATGTATTGTGGCTTTCAATTACCAGATTGTCCAGGTAATGACAGTAAATTGACG
TGAAGTAATAGTTGTGATATAATGACCAATAGATGCCAAACAGCTTGTGGCCACACTCAT
GATGGGGTCACTTAATCCCTCTGTAGCAGCTGTCAAGGGGTGGCAGGCACAAAAAGAGTG
ACCTTAGAAATAAGAGTTCTTCAAAAGGCACATGCCTGTGAGGGATACAATGTGATTTTA
AATTTTAATGCAAAACTCTACTTTCTGTTTATTTTTTTATCATTTAAACTGATAAGCACT
TTTTGTGTCAATATAAAATGTTCTAAAACCGAAGAAATGCTAAGACACCTGTCTTGTGAA
GGAAGACACATGTGTCTCTCCTGACGAGTGGATTCTCCTAGGATCAGAAGAAACTGAGGC
ATAGTGTCATGTGCTCAGTAGTTGCCAAAGTCTACCAACTTTGGGGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-588, gnl|bosTau2|chr18 (26695291-26694692)
               

               
               1-588, gnl|Hg17|chr16 (65313548-65312968)
               

               
               1-588, gnl|Mm7|chr8 (103018348-103017791)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-588, gnl|bosTau2|chr18 (26695291-26694692)
               

               
               1-588, gnl|Hg17|chr16 (65313548-65312968)
               

               
               1-588, gnl|Mm7|chr8 (103018348-103017791)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cut (0.169924)
               

               
               nmm (0.132802)
               

               
               sug (0.127291)
               

               
               ebs (0.118301)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)
               

               
               nmm (0.132802)
               

               
               sug (0.127291)
               

               
               ebs (0.118301)

	1-588, gnl\|bosTau2\|chr18 (26695291-26694692)
	1-588, gnl\|Hg17\|chr16 (65313548-65312968)
	1-588, gnl\|Mm7\|chr8 (103018348-103017791)