Non-Coding RNA Search

Ss1.1-rnmm24c_c16.5

Sequence:


               
               CTTACCTGCCCCCACAGTTCTCACCGTCATCTGCATGTCCCCAACCAGGCCAGGGACTAG
------------------------------------------------------------
------------------------GGCCTCAGTATCCCGAGGACCCTAAAGCATTCCCTT
CTCATAGAGGAGTCTTCTTGCCTGAGATTTAAAGTAGCCCCCCTGCCCCAACTGCCACCA
TGGCTAAGGGACTCTATCCGTTGAAAGCATTTTCCTGAGGCCCTGCTCTCTGCCAACGGA
GTGCCAAGATGTCACTTGTTTACACACAAACTGCCACATCCCAAGGTCCACTCTTGCCCC
TCGTGTCCCAGGCCTGCCCCAGTGTCCCAGACTTGCTTTCTCTGTCACTTACATCTGGTT
GAAGGGGCTCTTGGGTTCCCACGCAGGCCGGAGTTTGGGTAGTTGTTCTTCCTCTAATCC
CATCCGCTCGCCTGCACATCACTTAGTGATTCAAAGGGGGTTTGCCGAGTGAGAAAGCGC
TGCTGTGAGCCCCCAAGTGGAGCCAGGCCCCTCCCGCAGCGCTGGGAGACCCGGTGTCTG
TCCTGGGCCTCGCCTCTGCTCTCAGGTCCTCTCAGAGGCAGACAGACGCCCAGACAAGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTACCTGCCCCCACAGTTCTCACCGTCATCTGCATGTCCCCAACCAGGCCAGGGACTAG
------------------------------------------------------------
------------------------GGCCTCAGTATCCCGAGGACCCTAAAGCATTCCCTT
CTCATAGAGGAGTCTTCTTGCCTGAGATTTAAAGTAGCCCCCCTGCCCCAACTGCCACCA
TGGCTAAGGGACTCTATCCGTTGAAAGCATTTTCCTGAGGCCCTGCTCTCTGCCAACGGA
GTGCCAAGATGTCACTTGTTTACACACAAACTGCCACATCCCAAGGTCCACTCTTGCCCC
TCGTGTCCCAGGCCTGCCCCAGTGTCCCAGACTTGCTTTCTCTGTCACTTACATCTGGTT
GAAGGGGCTCTTGGGTTCCCACGCAGGCCGGAGTTTGGGTAGTTGTTCTTCCTCTAATCC
CATCCGCTCGCCTGCACATCACTTAGTGATTCAAAGGGGGTTTGCCGAGTGAGAAAGCGC
TGCTGTGAGCCCCCAAGTGGAGCCAGGCCCCTCCCGCAGCGCTGGGAGACCCGGTGTCTG
TCCTGGGCCTCGCCTCTGCTCTCAGGTCCTCTCAGAGGCAGACAGACGCCCAGACAAGCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               60-336, gnl|bosTau2|chr15 (35567329-35567608)
               

               
               60-336, gnl|Hg17|chr11 (76512717-76512997)
               

               
               60-336, gnl|Mm7|chr7 (94155624-94155317)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-336, gnl|bosTau2|chr15 (35567329-35567608)
               

               
               60-336, gnl|Hg17|chr11 (76512717-76512997)
               

               
               60-336, gnl|Mm7|chr7 (94155624-94155317)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               nmm (0.132802)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)
               

               
               jej (0.0989218)

	60-336, gnl\|bosTau2\|chr15 (35567329-35567608)
	60-336, gnl\|Hg17\|chr11 (76512717-76512997)
	60-336, gnl\|Mm7\|chr7 (94155624-94155317)