Ss1.1-rnmm25c_i18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGGGCATCCTGCAGCTGGAAGCTGAGGTGAACGTGTCGTCGCGGGTGGCGCTGGGCGT AAGCGCGCGGGGTACGCCCATCCTCATCCTCAAACGCTGCAGCACGCTCCTGGGCCACAT CAGCCTGCTCTCGGGGCTGCTGCCCCCACCACTCTTTGGGGTCGTGGAACAGACACTCTT CAAGGTGCTACCGGAATTGCTGTGCCCCGTGGTGGACAGTGTGCTGGGCGTGGTGAATGA GCTCCTGGGGGCCGTGCTGTGCCTGGTGCCCCTCGGGGCTCTTGGGTCGGTGGAATTCAC TCTGGCCACACTACCTCTCATCTCTAACCAGTACATAGAGCTGGACATCAACCCCATCGT GAAGAGCGTAGCAGGTGACATCATCGATTTCCCCAAGCCCCCCAAGCCCATCAAGGTGCC CCCCAAGGATGACCACACATCCCAGGTGACCGTGCCCTTGTACCTCTTCAACACCGTGTT TGGGCTTCTGCAGACCAATGGTGCCCTCGACCTGGACATCACCCCTGAGCTGGTCCAGGT TCCCAGCAATGTCCCACTGACAACTACAGACCTGGCAGCTTTGGTCCCTGAGGCCCTGAG GAAGCTGCCCCCGGGCCAACAGCTCCTGCTCTCACTGCGGGTGAAAGAAGCGCCAGCAGT CACACTCCAGAACAAGAAGGCCACAGTCTCTATCCCAGCTGACATCCATGTGCTGTTCTA CCTCCCTAAAAGGACCCCTGAAGCCCTCTTTGAGCTGAATGGAGTGATGACTTTAAATGC CCAGCTGGCTCCCTCGGCTACCAAGCTGCACCTGTCCCTGTCCCTGGAACGGCTCAGTGT CAAGTTGGCCTCCTCCTTCACCCATGCCTTTGATGCGTCCCGTTTGGAAGAATGGCTCAG TGATGTGGTCCGGGTGGCTTACGTGCCGAAGCTCAATGTGAACCTGGATGTTGGAATTCC CCTGCCTAAGGTTCTCAATGTCAATTTTGCCAATGCAGCCCTGGAGATCATAGAGAATGC CGTTGTGCTGACCGTGGCGTCCTGAGGCTGACACATGGCTGCCACCCCTCCCTGTTATCT GCCGGAGTCCTGTCCGCCTACCCACTCTGCCTCAATATCCTTCCCAGGCTCTAGCCTGTG TCGGTGACAGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGGGCATCCTGCAGCTGGAAGCTGAGGTGAACGTGTCGTCGCGGGTGGCGCTGGGCGT AAGCGCGCGGGGTACGCCCATCCTCATCCTCAAACGCTGCAGCACGCTCCTGGGCCACAT CAGCCTGCTCTCGGGGCTGCTGCCCCCACCACTCTTTGGGGTCGTGGAACAGACACTCTT CAAGGTGCTACCGGAATTGCTGTGCCCCGTGGTGGACAGTGTGCTGGGCGTGGTGAATGA GCTCCTGGGGGCCGTGCTGTGCCTGGTGCCCCTCGGGGCTCTTGGGTCGGTGGAATTCAC TCTGGCCACACTACCTCTCATCTCTAACCAGTACATAGAGCTGGACATCAACCCCATCGT GAAGAGCGTAGCAGGTGACATCATCGATTTCCCCAAGCCCCCCAAGCCCATCAAGGTGCC CCCCAAGGATGACCACACATCCCAGGTGACCGTGCCCTTGTACCTCTTCAACACCGTGTT TGGGCTTCTGCAGACCAATGGTGCCCTCGACCTGGACATCACCCCTGAGCTGGTCCAGGT TCCCAGCAATGTCCCACTGACAACTACAGACCTGGCAGCTTTGGTCCCTGAGGCCCTGAG GAAGCTGCCCCCGGGCCAACAGCTCCTGCTCTCACTGCGGGTGAAAGAAGCGCCAGCAGT CACACTCCAGAACAAGAAGGCCACAGTCTCTATCCCAGCTGACATCCATGTGCTGTTCTA CCTCCCTAAAAGGACCCCTGAAGCCCTCTTTGAGCTGAATGGAGTGATGACTTTAAATGC CCAGCTGGCTCCCTCGGCTACCAAGCTGCACCTGTCCCTGTCCCTGGAACGGCTCAGTGT CAAGTTGGCCTCCTCCTTCACCCATGCCTTTGATGCGTCCCGTTTGGAAGAATGGCTCAG TGATGTGGTCCGGGTGGCTTACGTGCCGAAGCTCAATGTGAACCTGGATGTTGGAATTCC CCTGCCTAAGGTTCTCAATGTCAATTTTGCCAATGCAGCCCTGGAGATCATAGAGAATGC CGTTGTGCTGACCGTGGCGTCCTGAGGCTGACACATGGCTGCCACCCCTCCCTGTTATCT GCCGGAGTCCTGTCCGCCTACCCACTCTGCCTCAATATCCTTCCCAGGCTCTAGCCTGTG TCGGTGACAGTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 2-136, gnl|bosTau2|chr13 (47078903-47079037) | |
| 2-136, gnl|Hg17|chr20 (31111365-31111499) | |
| 2-136, gnl|Mm7|chr2 (153663432-153663566) | |
| 353-534, gnl|bosTau2|chr13 (47083579-47083760) | |
| 353-534, gnl|canFam2|chr24 (25300540-25300731) | |
| 353-534, gnl|hg17|chr20 (31116103-31116283) | |
| 353-534, gnl|Hg17|chr20 (31116133-31116314) | |
| 353-534, gnl|loxAfr1|scaffold_102438 (490-309) | |
| 353-534, gnl|mm7|chr2 (153666574-153666752) | |
| 353-534, gnl|Mm7|chr2 (153666602-153666783) | |
| 353-534, gnl|monDom2|scaffold_6 (223972-224152) | |
| 353-534, gnl|panTro1|chr21 (33091897-33092077) | |
| 353-534, gnl|rheMac2|chr10 (31486093-31485913) | |
| 353-534, gnl|rn3|chr3 (144216603-144216781) | |
| 591-767, gnl|bosTau2|chr13 (47086734-47086910) | |
| 591-767, gnl|canFam2|chr24 (25304259-25304969) | |
| 591-767, gnl|dasNov1|scaffold_2706 (4600-3905) | |
| 591-767, gnl|hg17|chr20 (31120133-31120824) | |
| 591-767, gnl|Hg17|chr20 (31120268-31120444) | |
| 591-767, gnl|mm7|chr2 (153669373-153669889) | |
| 591-767, gnl|Mm7|chr2 (153669510-153669686) | |
| 591-767, gnl|panTro1|chr21 (33095973-33096676) | |
| 591-767, gnl|rheMac2|chr10 (31481881-31481194) | |
| 591-767, gnl|rn3|chr3 (144219409-144219917) | |
| 1014-1152, gnl|bosTau2|chr13 (47093072-47093209) | |
| 1014-1152, gnl|canFam2|chr24 (25308649-25308960) | |
| 1014-1152, gnl|dasNov1|scaffold_111213 (4174-3845) | |
| 1014-1152, gnl|echTel1|scaffold_178168 (6061-5757) | |
| 1014-1152, gnl|hg17|chr20 (31124874-31125156) | |
| 1014-1152, gnl|Hg17|chr20 (31125041-31125174) | |
| 1014-1152, gnl|loxAfr1|scaffold_91398 (6473-6176) | |
| 1014-1152, gnl|mm7|chr2 (153673421-153673679) | |
| 1014-1152, gnl|Mm7|chr2 (153673564-153673697) | |
| 1014-1152, gnl|panTro1|chr21 (33100727-33101009) | |
| 1014-1152, gnl|rheMac2|chr10 (31477158-31476884) | |
| 1014-1152, gnl|rn3|chr3 (144223085-144223322) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-136, gnl|bosTau2|chr13 (47078903-47079037) | |
| 2-136, gnl|Hg17|chr20 (31111365-31111499) | |
| 2-136, gnl|Mm7|chr2 (153663432-153663566) | |
| 353-534, gnl|bosTau2|chr13 (47083579-47083760) | |
| 353-534, gnl|canFam2|chr24 (25300540-25300731) | |
| 353-534, gnl|hg17|chr20 (31116103-31116283) | |
| 353-534, gnl|Hg17|chr20 (31116133-31116314) | |
| 353-534, gnl|loxAfr1|scaffold_102438 (490-309) | |
| 353-534, gnl|mm7|chr2 (153666574-153666752) | |
| 353-534, gnl|Mm7|chr2 (153666602-153666783) | |
| 353-534, gnl|monDom2|scaffold_6 (223972-224152) | |
| 353-534, gnl|panTro1|chr21 (33091897-33092077) | |
| 353-534, gnl|rheMac2|chr10 (31486093-31485913) | |
| 353-534, gnl|rn3|chr3 (144216603-144216781) | |
| 591-767, gnl|bosTau2|chr13 (47086734-47086910) | |
| 591-767, gnl|canFam2|chr24 (25304259-25304969) | |
| 591-767, gnl|dasNov1|scaffold_2706 (4600-3905) | |
| 591-767, gnl|hg17|chr20 (31120133-31120824) | |
| 591-767, gnl|Hg17|chr20 (31120268-31120444) | |
| 591-767, gnl|mm7|chr2 (153669373-153669889) | |
| 591-767, gnl|Mm7|chr2 (153669510-153669686) | |
| 591-767, gnl|panTro1|chr21 (33095973-33096676) | |
| 591-767, gnl|rheMac2|chr10 (31481881-31481194) | |
| 591-767, gnl|rn3|chr3 (144219409-144219917) | |
| 1014-1152, gnl|bosTau2|chr13 (47093072-47093209) | |
| 1014-1152, gnl|canFam2|chr24 (25308649-25308960) | |
| 1014-1152, gnl|dasNov1|scaffold_111213 (4174-3845) | |
| 1014-1152, gnl|echTel1|scaffold_178168 (6061-5757) | |
| 1014-1152, gnl|hg17|chr20 (31124874-31125156) | |
| 1014-1152, gnl|Hg17|chr20 (31125041-31125174) | |
| 1014-1152, gnl|loxAfr1|scaffold_91398 (6473-6176) | |
| 1014-1152, gnl|mm7|chr2 (153673421-153673679) | |
| 1014-1152, gnl|Mm7|chr2 (153673564-153673697) | |
| 1014-1152, gnl|panTro1|chr21 (33100727-33101009) | |
| 1014-1152, gnl|rheMac2|chr10 (31477158-31476884) | |
| 1014-1152, gnl|rn3|chr3 (144223085-144223322) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (1.19522) |