Ss1.1-rnmm27c_d9.5
|
AGGCCTGGGGGCCTCCAGGAAGTCTTGCGGACCACTCATTTCTAGAGAAACTGCTCCTCC
CTAAAGCCGATCTGGTTGGATCCAGTGCAGTCTTGTTTCAGGCTTCGGGGCCCGTCCGCA
AACCAGAACCAGATCACCTCATCCCGGTCGCAGTGAAGGTGTTGCACCCTGGCCTGCTCG
CCCAGGTACAGATGGACCTGCTGCTGATGAAGATGGGCAGCCGAGTCCTTGCACTTTTAC
CAGGAATCAAGTGGCTCAGCTTGCCTGAGATTGTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGCCTGGGGGCCTCCAGGAAGTCTTGCGGACCACTCATTTCTAGAGAAACTGCTCCTCC
CTAAAGCCGATCTGGTTGGATCCAGTGCAGTCTTGTTTCAGGCTTCGGGGCCCGTCCGCA
AACCAGAACCAGATCACCTCATCCCGGTCGCAGTGAAGGTGTTGCACCCTGGCCTGCTCG
CCCAGGTACAGATGGACCTGCTGCTGATGAAGATGGGCAGCCGAGTCCTTGCACTTTTAC
CAGGAATCAAGTGGCTCAGCTTGCCTGAGATTGTGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
157-276, gnl|bosTau2|chr27 (12050160-12050279) |
|
157-276, gnl|canFam2|chr16 (11325349-11325217) |
|
157-276, gnl|danRer3|chr25 (1053224-1053099) |
|
157-276, gnl|dasNov1|scaffold_37372 (48012-47884) |
|
157-276, gnl|echTel1|scaffold_280687 (46559-46430) |
|
157-276, gnl|fr1|chrUn (66710120-66710252) |
|
157-276, gnl|galGal2|chr1 (53581121-53581249) |
|
157-276, gnl|hg17|chr7 (139827580-139827712) |
|
157-276, gnl|Hg17|chr7 (139827593-139827712) |
|
157-276, gnl|mm7|chr6 (39506376-39506505) |
|
157-276, gnl|Mm7|chr6 (39506386-39506505) |
|
157-276, gnl|monDom2|scaffold_22 (1443602-1443470) |
|
157-276, gnl|oryCun1|scaffold_49943 (717-587) |
|
157-276, gnl|panTro1|chr6 (142587143-142587275) |
|
157-276, gnl|rheMac2|chr3 (178159769-178159901) |
|
157-276, gnl|rn3|chr4 (67359687-67359816) |
|
157-276, gnl|tetNig1|chr13 (8987028-8987148) |
|
157-276, gnl|xenTro1|scaffold_835 (146274-146155) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
157-276, gnl|bosTau2|chr27 (12050160-12050279) |
|
157-276, gnl|canFam2|chr16 (11325349-11325217) |
|
157-276, gnl|danRer3|chr25 (1053224-1053099) |
|
157-276, gnl|dasNov1|scaffold_37372 (48012-47884) |
|
157-276, gnl|echTel1|scaffold_280687 (46559-46430) |
|
157-276, gnl|fr1|chrUn (66710120-66710252) |
|
157-276, gnl|galGal2|chr1 (53581121-53581249) |
|
157-276, gnl|hg17|chr7 (139827580-139827712) |
|
157-276, gnl|Hg17|chr7 (139827593-139827712) |
|
157-276, gnl|mm7|chr6 (39506376-39506505) |
|
157-276, gnl|Mm7|chr6 (39506386-39506505) |
|
157-276, gnl|monDom2|scaffold_22 (1443602-1443470) |
|
157-276, gnl|oryCun1|scaffold_49943 (717-587) |
|
157-276, gnl|panTro1|chr6 (142587143-142587275) |
|
157-276, gnl|rheMac2|chr3 (178159769-178159901) |
|
157-276, gnl|rn3|chr4 (67359687-67359816) |
|
157-276, gnl|tetNig1|chr13 (8987028-8987148) |
|
157-276, gnl|xenTro1|scaffold_835 (146274-146155) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
pla (0.133672) |
|
nmm (0.132802) |
