Non-Coding RNA Search

Ss1.1-rnmm27c_g9.5

Sequence:


               
               CTGCGGATCCCGTCTTCCTCCCTCCCTGCCCCCTCCGCTTGTCGTCGCCGCCGCCAGGTC
CGGGGCAACGAGCAGAGGCGCCGCCCGCCGGGAATGTGAACGCGGAGCCGCCGGCGGAGT
CGAAACGGGGTCGGTGCCGATTTGATGGGACGGGTCCGCGGGGGAGGGTCGTGAGGCCGC
CGCCGCCGCCGCCGCCGCCGCCGGAGCGCAGAGGTTCAGGTCCGGCCGTGAGGCNTAGAG
GCGCCGCCGCCGCCGCGGAACCGGAGGGACGCTGCCCCGGAGCCGTCGCCCGGGCTCCCC
GCGCCGTCCGGACCGCCCCCCGCTGCTCCGGCCCCGCCGGCCGCCCCCCGCTTCGGCCTC
TCCCCGTCTCCTGCCCCTCGGAAACCACAGGTCATCTTCGGATTCTTCTCCAGAAGCTTC
AAGTAGGGATATGTCCTCAGCACCAACTACTCCTCCATCAGTGGATAAAGTAGACGGATT
TTCTCGGAAGTCCGTCAGAAAAGCCAGACAGAAGAGGTCGCAAAGTTCCTCACAGTTTAG
GTCTCAAGGCAAGCCTATTGAGTTAACACCTCTGCCACTGCTAAAAGACGTTCCATCCTC
AGAGCAGCCTGAACTGTTCCTAAAGAAACTTCAGCAGTGCTGTGTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCGGATCCCGTCTTCCTCCCTCCCTGCCCCCTCCGCTTGTCGTCGCCGCCGCCAGGTC
CGGGGCAACGAGCAGAGGCGCCGCCCGCCGGGAATGTGAACGCGGAGCCGCCGGCGGAGT
CGAAACGGGGTCGGTGCCGATTTGATGGGACGGGTCCGCGGGGGAGGGTCGTGAGGCCGC
CGCCGCCGCCGCCGCCGCCGCCGGAGCGCAGAGGTTCAGGTCCGGCCGTGAGGCNTAGAG
GCGCCGCCGCCGCCGCGGAACCGGAGGGACGCTGCCCCGGAGCCGTCGCCCGGGCTCCCC
GCGCCGTCCGGACCGCCCCCCGCTGCTCCGGCCCCGCCGGCCGCCCCCCGCTTCGGCCTC
TCCCCGTCTCCTGCCCCTCGGAAACCACAGGTCATCTTCGGATTCTTCTCCAGAAGCTTC
AAGTAGGGATATGTCCTCAGCACCAACTACTCCTCCATCAGTGGATAAAGTAGACGGATT
TTCTCGGAAGTCCGTCAGAAAAGCCAGACAGAAGAGGTCGCAAAGTTCCTCACAGTTTAG
GTCTCAAGGCAAGCCTATTGAGTTAACACCTCTGCCACTGCTAAAAGACGTTCCATCCTC
AGAGCAGCCTGAACTGTTCCTAAAGAAACTTCAGCAGTGCTGTGTCAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55640809|ref|XP_509998.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55640809|ref|XP_509998.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-423, gnl|bosTau2|chr10 (49353514-49353114)
               

               
               1-423, gnl|Hg17|chr14 (63079667-63079250)
               

               
               1-423, gnl|Mm7|chr12 (73554530-73554092)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-423, gnl|bosTau2|chr10 (49353514-49353114)
               

               
               1-423, gnl|Hg17|chr14 (63079667-63079250)
               

               
               1-423, gnl|Mm7|chr12 (73554530-73554092)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               nmm (0.132802)

	1-423, gnl\|bosTau2\|chr10 (49353514-49353114)
	1-423, gnl\|Hg17\|chr14 (63079667-63079250)
	1-423, gnl\|Mm7\|chr12 (73554530-73554092)