Ss1.1-rnmm28c_a21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGCGCCGGAGCCCCGACGGCGCCTCGCTGCATGGAGCTGAGCGACTGAGAGCTGTCGCC ACCCGACAGCTTCTGACTTCTTTCGGGACCCCGGCGTCCAAGCCCGCTCACCCTCTCTTG TCAGCCTCAGGGCGTCCAACGGCTCCGGCGGCCCCTGGGTCCCTGGGACCTGGCGTTCCG GGCGCCAGCCATGGAGCGGTGCAGCCGCTGCCATCGCCTCCTCCTGCTTGTACCGCTGGT GCTTGGGCTGAGCGCGGCCCCGGCCTGGGCAGGTGCATCGCCCGTGGATGTGCTTCGGGC CCTGAGGTTCCCCTCCCTCCCTGATGGCGTCCGGAGGACGAGGGGCATCTGTCCTGCTGA TGTGGCCTACCGAGTGTCTCGCCCTGCCCAGCTCAGTGCACCCACCCGCCAGCTCTTCCC AGGAGGCTTTCCCAAAGATTTCTCTCTATTGACTGCTGTCCGGACCCGCCCTGGCCTCCA GGCTCCGCTCCTGACTCTCTATAGTGCCCAGGGTGTCCGACAGCTGGGCCTGGAGCTCGG CCGACCCATCCGTTTCCTGTATGAGGACCAGACAGGACGGCCTCAGCCCCCAGCTCAGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGCGCCGGAGCCCCGACGGCGCCTCGCTGCATGGAGCTGAGCGACTGAGAGCTGTCGCC ACCCGACAGCTTCTGACTTCTTTCGGGACCCCGGCGTCCAAGCCCGCTCACCCTCTCTTG TCAGCCTCAGGGCGTCCAACGGCTCCGGCGGCCCCTGGGTCCCTGGGACCTGGCGTTCCG GGCGCCAGCCATGGAGCGGTGCAGCCGCTGCCATCGCCTCCTCCTGCTTGTACCGCTGGT GCTTGGGCTGAGCGCGGCCCCGGCCTGGGCAGGTGCATCGCCCGTGGATGTGCTTCGGGC CCTGAGGTTCCCCTCCCTCCCTGATGGCGTCCGGAGGACGAGGGGCATCTGTCCTGCTGA TGTGGCCTACCGAGTGTCTCGCCCTGCCCAGCTCAGTGCACCCACCCGCCAGCTCTTCCC AGGAGGCTTTCCCAAAGATTTCTCTCTATTGACTGCTGTCCGGACCCGCCCTGGCCTCCA GGCTCCGCTCCTGACTCTCTATAGTGCCCAGGGTGTCCGACAGCTGGGCCTGGAGCTCGG CCGACCCATCCGTTTCCTGTATGAGGACCAGACAGGACGGCCTCAGCCCCCAGCTCAGCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 79-189, + strand, RNAz p=0.923602 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 79-189, + strand, RNAz p=0.923602 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC053886, + |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-274, gnl|bosTau2|chr23 (5566763-5567023) | |
| 1-274, gnl|Hg17|chr6 (33268192-33267912) | |
| 1-274, gnl|Mm7|chr17 (32118342-32118581) | |
| 417-600, gnl|bosTau2|chr23 (5570018-5570201) | |
| 417-600, gnl|Hg17|chr6 (33264954-33264766) | |
| 417-600, gnl|Mm7|chr17 (32121484-32121667) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-274, gnl|bosTau2|chr23 (5566763-5567023) | |
| 1-274, gnl|Hg17|chr6 (33268192-33267912) | |
| 1-274, gnl|Mm7|chr17 (32118342-32118581) | |
| 417-600, gnl|bosTau2|chr23 (5570018-5570201) | |
| 417-600, gnl|Hg17|chr6 (33264954-33264766) | |
| 417-600, gnl|Mm7|chr17 (32121484-32121667) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) |