Non-Coding RNA Search

Ss1.1-rnmm28c_b10.5

Sequence:


               
               GAGGAGAAGTTAGTTTCAGAGCAGGGACGAGTAACCTTTCTGTAATGAAGACTTGTGTAA
ATCTGTATGCTCTTTCGTGTCACCTGCAGATAGTTAGTCAGTTCAGCAGGAGCAGAGACT
GGGTGAAAACGCTAACGGGGTGTAATTCAGTGTTTTTGTGTTGTACAGCCTGAGAAATGC
CAGTGGCCTGACGGCGGCAGACATTGCTCAAACCCAGGGTTTCCAAGAGTGTACCCAGTT
TCTCTTGAACCTCCAGAACTGTCGTCTGAACCGTTTCTATAGCAATGGCACCTTAAACGG
GGGCCATCCGGGTGTATTTCCCAACCACGTTAGTGTGGGAACAAATCGCAAGAGATGCCT
GGAAGATCCGGAGCCCTTTGGAGTGAAGAAAGCTAGAACCGCAGGTGAGACATTTTGGGT
GGGCACCAGCAGGCTCGTTTCCTTCCTTTTAACGTGTTTTCTTTTTTGCGGCTGAAAGCG
CCTTCGTCAGGACTCCTTCACGTAAGGGGCACTGTGCCTGGAGGACTCTGGTGCAGTGAC
GGAGGCGTTTTTCCCGTGGGGCCACCCGGAAGATTGGCCGTTTAACCCGGGGGGAGGATG
GGAGAGCGCAGTTGACGGCTCACACGTGAATGTGTGTCTCTGACTTTGCGCACACCCAGG
TTTACTGGCCTTGAAGGAGCGTTTTCATTTGTTGTACCTGTTTGAAATATAACTATTAAA
AAAAATCTGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGAGAAGTTAGTTTCAGAGCAGGGACGAGTAACCTTTCTGTAATGAAGACTTGTGTAA
ATCTGTATGCTCTTTCGTGTCACCTGCAGATAGTTAGTCAGTTCAGCAGGAGCAGAGACT
GGGTGAAAACGCTAACGGGGTGTAATTCAGTGTTTTTGTGTTGTACAGCCTGAGAAATGC
CAGTGGCCTGACGGCGGCAGACATTGCTCAAACCCAGGGTTTCCAAGAGTGTACCCAGTT
TCTCTTGAACCTCCAGAACTGTCGTCTGAACCGTTTCTATAGCAATGGCACCTTAAACGG
GGGCCATCCGGGTGTATTTCCCAACCACGTTAGTGTGGGAACAAATCGCAAGAGATGCCT
GGAAGATCCGGAGCCCTTTGGAGTGAAGAAAGCTAGAACCGCAGGTGAGACATTTTGGGT
GGGCACCAGCAGGCTCGTTTCCTTCCTTTTAACGTGTTTTCTTTTTTGCGGCTGAAAGCG
CCTTCGTCAGGACTCCTTCACGTAAGGGGCACTGTGCCTGGAGGACTCTGGTGCAGTGAC
GGAGGCGTTTTTCCCGTGGGGCCACCCGGAAGATTGGCCGTTTAACCCGGGGGGAGGATG
GGAGAGCGCAGTTGACGGCTCACACGTGAATGTGTGTCTCTGACTTTGCGCACACCCAGG
TTTACTGGCCTTGAAGGAGCGTTTTCATTTGTTGTACCTGTTTGAAATATAACTATTAAA
AAAAATCTGCCC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               4-732, gnl|bosTau2|chr12 (45962019-45961296)
               

               
               4-732, gnl|Hg17|chr13 (110343776-110343051)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-732, gnl|bosTau2|chr12 (45962019-45961296)
               

               
               4-732, gnl|Hg17|chr13 (110343776-110343051)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               nmm (0.132802)
               

               
               clu (0.119646)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)
               

               
               clu (0.119646)

	4-732, gnl\|bosTau2\|chr12 (45962019-45961296)
	4-732, gnl\|Hg17\|chr13 (110343776-110343051)