Ss1.1-rnmm28c_j10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGATCCCGCTAATCTGCTCGGCTGACCGGTTGGGCAGCTGCACCGGCTGTTCACCTTC CCGGCCAGGCAGGCCCAGGACCAGCGCGAGCTGTGCGAGGACCAGAGCATGTGGGGGACG CGGCTGGCGCTGCTGGCGCTGGTGCTGGCTGCCCGCTGGGAGCTCGTGGTGGCCCTGCAA TGCTACACCTGTCACGAGCCCACCAGTGTGTCCAGCTGTGTCACCACCGCCACCTGCAGC TCCAACGAAACCATGTGCAAAACCACACTCTACTCCCTGGAGATCGTGTACCCCTTTCTG GGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGCGTGCCCTCGGACGTGGATGGC ATCGGCTTGACCCGGCCCGTGTCCTGCTGCAACACTGACCTGTGCAACGTGGATGGGGCG TCTGCCCTGGGCAGCCCCCGCGGCCTGGCCACCACCCTCCTGCTCAGCCTCCTCATCATC CTGCAACTCTAGAGCCCCCCCCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGATCCCGCTAATCTGCTCGGCTGACCGGTTGGGCAGCTGCACCGGCTGTTCACCTTC CCGGCCAGGCAGGCCCAGGACCAGCGCGAGCTGTGCGAGGACCAGAGCATGTGGGGGACG CGGCTGGCGCTGCTGGCGCTGGTGCTGGCTGCCCGCTGGGAGCTCGTGGTGGCCCTGCAA TGCTACACCTGTCACGAGCCCACCAGTGTGTCCAGCTGTGTCACCACCGCCACCTGCAGC TCCAACGAAACCATGTGCAAAACCACACTCTACTCCCTGGAGATCGTGTACCCCTTTCTG GGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGCGTGCCCTCGGACGTGGATGGC ATCGGCTTGACCCGGCCCGTGTCCTGCTGCAACACTGACCTGTGCAACGTGGATGGGGCG TCTGCCCTGGGCAGCCCCCGCGGCCTGGCCACCACCCTCCTGCTCAGCCTCCTCATCATC CTGCAACTCTAGAGCCCCCCCCTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 166-283, gnl|bosTau2|chr14 (1476241-1476124) | |
| 166-283, gnl|canFam2|chr13 (39822224-39822348) | |
| 166-283, gnl|echTel1|scaffold_122361 (692-568) | |
| 166-283, gnl|hg17|chr8 (143829465-143829589) | |
| 166-283, gnl|Hg17|chr8 (143829591-143829474) | |
| 166-283, gnl|loxAfr1|scaffold_156178 (1676-1800) | |
| 166-283, gnl|mm7|chr15 (74813511-74813635) | |
| 166-283, gnl|Mm7|chr15 (74813637-74813520) | |
| 166-283, gnl|monDom2|scaffold_504 (37985-37875) | |
| 166-283, gnl|panTro1|chr7 (147138320-147138444) | |
| 166-283, gnl|rheMac2|chr8 (145293040-145293164) | |
| 166-283, gnl|rn3|chr7 (112881203-112881327) | |
| 286-496, gnl|bosTau2|chr14 (1475757-1475544) | |
| 286-496, gnl|canFam2|chr13 (39821595-39821936) | |
| 286-496, gnl|echTel1|scaffold_122360 (572-921) | |
| 286-496, gnl|hg17|chr8 (143828693-143829051) | |
| 286-496, gnl|Hg17|chr8 (143828903-143828692) | |
| 286-496, gnl|loxAfr1|scaffold_156178 (1029-1357) | |
| 286-496, gnl|mm7|chr15 (74812865-74813209) | |
| 286-496, gnl|Mm7|chr15 (74813090-74812879) | |
| 286-496, gnl|monDom2|scaffold_504 (38872-38423) | |
| 286-496, gnl|oryCun1|scaffold_78690 (507-156) | |
| 286-496, gnl|panTro1|chr7 (147137542-147137902) | |
| 286-496, gnl|rheMac2|chr8 (145292329-145292692) | |
| 286-496, gnl|rn3|chr7 (112880592-112880922) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 166-283, gnl|bosTau2|chr14 (1476241-1476124) | |
| 166-283, gnl|canFam2|chr13 (39822224-39822348) | |
| 166-283, gnl|echTel1|scaffold_122361 (692-568) | |
| 166-283, gnl|hg17|chr8 (143829465-143829589) | |
| 166-283, gnl|Hg17|chr8 (143829591-143829474) | |
| 166-283, gnl|loxAfr1|scaffold_156178 (1676-1800) | |
| 166-283, gnl|mm7|chr15 (74813511-74813635) | |
| 166-283, gnl|Mm7|chr15 (74813637-74813520) | |
| 166-283, gnl|monDom2|scaffold_504 (37985-37875) | |
| 166-283, gnl|panTro1|chr7 (147138320-147138444) | |
| 166-283, gnl|rheMac2|chr8 (145293040-145293164) | |
| 166-283, gnl|rn3|chr7 (112881203-112881327) | |
| 286-496, gnl|bosTau2|chr14 (1475757-1475544) | |
| 286-496, gnl|canFam2|chr13 (39821595-39821936) | |
| 286-496, gnl|echTel1|scaffold_122360 (572-921) | |
| 286-496, gnl|hg17|chr8 (143828693-143829051) | |
| 286-496, gnl|Hg17|chr8 (143828903-143828692) | |
| 286-496, gnl|loxAfr1|scaffold_156178 (1029-1357) | |
| 286-496, gnl|mm7|chr15 (74812865-74813209) | |
| 286-496, gnl|Mm7|chr15 (74813090-74812879) | |
| 286-496, gnl|monDom2|scaffold_504 (38872-38423) | |
| 286-496, gnl|oryCun1|scaffold_78690 (507-156) | |
| 286-496, gnl|panTro1|chr7 (147137542-147137902) | |
| 286-496, gnl|rheMac2|chr8 (145292329-145292692) | |
| 286-496, gnl|rn3|chr7 (112880592-112880922) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ton (0.1755) | |
| nmm (0.132802) |