Ss1.1-rnmm30c_d24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAGAATTGGGGCGGCTACGTCACGATCTGGAACGTCAGAACAATGAATACAAGGTCCTC CTAGGTATCAAAAGCCACCTAGAGAAGGAAATCGCCACCTACCGCCAGCTCCTGGAGGGA GAGAGTAGAGGGTCAATGGAAGAATCTAAGTCGAGTGTGAAAGCTCCAAAGATCAAGGCC ATCACACGAGAGAGCGTCAATGGAAGAATAATTCTTTCTCAAGTGAATGAGCTCTAAAAG TACACATGAGACCAATAAAAGTTTCTGCCTGTGGTGAAAACTAACTTCCCCCAAAGGAAA GTCCTTGCTCAGACACAAATGGGTGAATTCTAAGAGGAATCTTGGGAGTTACCAGGCTCA GAAACTTTTTTTTTCTCTATATCACTCTCACCAGACATTCCATCATGATATTCATAGACC GCTGCACTTTTTCAAAGTATGAGTGCATGAGCTTAAAGCACTGCTTTCCTACTGCAATGA TCCAAGTCCCATCATTACAGCTCTATTTTGTAGCCAATAAAATGCCACACCAGTTGAAAA AAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAGAATTGGGGCGGCTACGTCACGATCTGGAACGTCAGAACAATGAATACAAGGTCCTC CTAGGTATCAAAAGCCACCTAGAGAAGGAAATCGCCACCTACCGCCAGCTCCTGGAGGGA GAGAGTAGAGGGTCAATGGAAGAATCTAAGTCGAGTGTGAAAGCTCCAAAGATCAAGGCC ATCACACGAGAGAGCGTCAATGGAAGAATAATTCTTTCTCAAGTGAATGAGCTCTAAAAG TACACATGAGACCAATAAAAGTTTCTGCCTGTGGTGAAAACTAACTTCCCCCAAAGGAAA GTCCTTGCTCAGACACAAATGGGTGAATTCTAAGAGGAATCTTGGGAGTTACCAGGCTCA GAAACTTTTTTTTTCTCTATATCACTCTCACCAGACATTCCATCATGATATTCATAGACC GCTGCACTTTTTCAAAGTATGAGTGCATGAGCTTAAAGCACTGCTTTCCTACTGCAATGA TCCAAGTCCCATCATTACAGCTCTATTTTGTAGCCAATAAAATGCCACACCAGTTGAAAA AAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-133, gnl|bosTau2|chr19 (33710143-33710275) | |
| 1-133, gnl|canFam2|chr9 (25093275-25093014) | |
| 1-133, gnl|danRer3|chr19 (1217544-1217802) | |
| 1-133, gnl|dasNov1|scaffold_67941 (7121-6896) | |
| 1-133, gnl|echTel1|scaffold_313865 (28652-28911) | |
| 1-133, gnl|fr1|chrUn (253380778-253380557) | |
| 1-133, gnl|galGal2|chr27_random (611281-611040) | |
| 1-133, gnl|hg17|chr17 (36335128-36335385) | |
| 1-133, gnl|Hg17|chr17 (36335262-36335130) | |
| 1-133, gnl|loxAfr1|scaffold_16606 (8310-8073) | |
| 1-133, gnl|mm7|chr11 (99589917-99590170) | |
| 1-133, gnl|Mm7|chr11 (99590051-99589919) | |
| 1-133, gnl|monDom2|scaffold_18 (50481095-50481326) | |
| 1-133, gnl|oryCun1|scaffold_173998 (59456-59717) | |
| 1-133, gnl|panTro1|chr19_random (18210698-18210955) | |
| 1-133, gnl|rheMac2|chr16 (51042371-51042628) | |
| 1-133, gnl|rn3|chr10 (88437846-88438094) | |
| 1-133, gnl|tetNig1|chr18 (940061-940289) | |
| 1-133, gnl|xenTro1|scaffold_394 (373479-373719) | |
| 162-536, gnl|bosTau2|chr19 (33712679-33713034) | |
| 162-536, gnl|Hg17|chr17 (36332854-36332476) | |
| 162-536, gnl|Mm7|chr11 (99587323-99586946) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-133, gnl|bosTau2|chr19 (33710143-33710275) | |
| 1-133, gnl|canFam2|chr9 (25093275-25093014) | |
| 1-133, gnl|danRer3|chr19 (1217544-1217802) | |
| 1-133, gnl|dasNov1|scaffold_67941 (7121-6896) | |
| 1-133, gnl|echTel1|scaffold_313865 (28652-28911) | |
| 1-133, gnl|fr1|chrUn (253380778-253380557) | |
| 1-133, gnl|galGal2|chr27_random (611281-611040) | |
| 1-133, gnl|hg17|chr17 (36335128-36335385) | |
| 1-133, gnl|Hg17|chr17 (36335262-36335130) | |
| 1-133, gnl|loxAfr1|scaffold_16606 (8310-8073) | |
| 1-133, gnl|mm7|chr11 (99589917-99590170) | |
| 1-133, gnl|Mm7|chr11 (99590051-99589919) | |
| 1-133, gnl|monDom2|scaffold_18 (50481095-50481326) | |
| 1-133, gnl|oryCun1|scaffold_173998 (59456-59717) | |
| 1-133, gnl|panTro1|chr19_random (18210698-18210955) | |
| 1-133, gnl|rheMac2|chr16 (51042371-51042628) | |
| 1-133, gnl|rn3|chr10 (88437846-88438094) | |
| 1-133, gnl|tetNig1|chr18 (940061-940289) | |
| 1-133, gnl|xenTro1|scaffold_394 (373479-373719) | |
| 162-536, gnl|bosTau2|chr19 (33712679-33713034) | |
| 162-536, gnl|Hg17|chr17 (36332854-36332476) | |
| 162-536, gnl|Mm7|chr11 (99587323-99586946) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nmm (0.398406) | |
| pty (0.285429) | |
| cmu (0.186393) | |
| lnt (0.142308) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.398406) | |
| pty (0.285429) | |
| cmu (0.186393) | |
| lnt (0.142308) |