Non-Coding RNA Search

Ss1.1-rnmm33c_i17.5

Sequence:


               
               CGGGCACGGGAGCCAAGCTGCTGCTGCTGCTGCTGTGGGCGGCGTGCGGCAAGTGCACCA
GAGCAGATGGGCCTAGCGGCTACACGTCGGTCATCGAGGTGACCAACGGGGGCCCCTGGG
GCGACTGGGCCTGGCCCGAGATGTGTCCTGACGGATTCTTCGCCAGTGGATTCTCCCTCA
AGGTGGAGCGCCCCCAAGGCATTCCCGGCGACGACACGGCTCTGAACGGGATCCGGCTGC
ACTGCGCCCGCGGGAATGCCGAGCTCAACACCCACGTGGTGGAGTCCCAGTCTGGCAGGT
GGGGCGTGTGGAGTGAGCCACTGTGGTGTCCGGGGGGCGGCTTCCTGGTGGCCTTCTCGC
TTCGCGTGGAAGCGCCCGTGACCCCTGGGGACAACACAGCTGCGAACAACGTGCGCTTCC
GCTGCTCAGACGGCACGGAGCTGCAGGGGCCCGGCCTGGCCTGGGGAGAGTTTGGGGACT
GGAGTGAGCCGTGCCCCAAAGGCGTGTGCGGCTTGCAGACGAAGATCGAGCGGCCCAGAG
GCCTCCGCGACGACACCGCTATTAATGACGCACGCTTTTTCTGCTGCCGCAATTGACACC
ATCGCCGCCCTCTCCCAGCCCCAAGTCTAGTCCCGCCGCCGCTATTAAAACTCCTCTGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCACGGGAGCCAAGCTGCTGCTGCTGCTGCTGTGGGCGGCGTGCGGCAAGTGCACCA
GAGCAGATGGGCCTAGCGGCTACACGTCGGTCATCGAGGTGACCAACGGGGGCCCCTGGG
GCGACTGGGCCTGGCCCGAGATGTGTCCTGACGGATTCTTCGCCAGTGGATTCTCCCTCA
AGGTGGAGCGCCCCCAAGGCATTCCCGGCGACGACACGGCTCTGAACGGGATCCGGCTGC
ACTGCGCCCGCGGGAATGCCGAGCTCAACACCCACGTGGTGGAGTCCCAGTCTGGCAGGT
GGGGCGTGTGGAGTGAGCCACTGTGGTGTCCGGGGGGCGGCTTCCTGGTGGCCTTCTCGC
TTCGCGTGGAAGCGCCCGTGACCCCTGGGGACAACACAGCTGCGAACAACGTGCGCTTCC
GCTGCTCAGACGGCACGGAGCTGCAGGGGCCCGGCCTGGCCTGGGGAGAGTTTGGGGACT
GGAGTGAGCCGTGCCCCAAAGGCGTGTGCGGCTTGCAGACGAAGATCGAGCGGCCCAGAG
GCCTCCGCGACGACACCGCTATTAATGACGCACGCTTTTTCTGCTGCCGCAATTGACACC
ATCGCCGCCCTCTCCCAGCCCCAAGTCTAGTCCCGCCGCCGCTATTAAAACTCCTCTGTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61885399|ref|XP_605104.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61885399|ref|XP_605104.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               295-660, gnl|bosTau2|chr19 (14454787-14455151)
               

               
               295-660, gnl|Hg17|chr17 (4635698-4635324)
               

               
               295-660, gnl|Mm7|chr11 (70595443-70595094)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               295-660, gnl|bosTau2|chr19 (14454787-14455151)
               

               
               295-660, gnl|Hg17|chr17 (4635698-4635324)
               

               
               295-660, gnl|Mm7|chr11 (70595443-70595094)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               nmm (1.46082)
               

               
               pty (0.570858)
               

               
               cov (0.132153)
               

               
               pgl (0.118483)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (1.46082)
               

               
               pty (0.570858)
               

               
               cov (0.132153)
               

               
               pgl (0.118483)

	295-660, gnl\|bosTau2\|chr19 (14454787-14455151)
	295-660, gnl\|Hg17\|chr17 (4635698-4635324)
	295-660, gnl\|Mm7\|chr11 (70595443-70595094)