Non-Coding RNA Search

Ss1.1-rnmm36c_k10.5

Sequence:


               
               CTGGAACCCATGGACACGTCGTATCCCCGCGAGGACCCCCGGGCCCCGACGCCCCGCAAG
GCCGACGGTGCCCACACGGCCCTCACGCTGGGGGCGCCGCGACCCCCACCTCGAGACCAC
CTGATCTGGTCGGTGTTCAGCACCCTCTACCTGAACCTGTGCTGCCTTGGCTTCCTGGCG
CTGGCTTACTCCATCAAGGCCCGAGATCAGAAGGTGGCTGGAGACCTGGAGGCAGCCCGG
CGTCTCGGCTCCAAAGCCAAGTGCTACAACATCCTGGCCACCATGTGGGCATTAGTGCCA
CCTCTGCTGCTCCTGGCGCTGGTGGTGACCGGCGCCCTGCACCTGTCCCGGCTGGCAAAG
GGCTCCGCCGCCTTCTTCAGCACCAAGTTCGACGACTCAGACTATGACTGACAGGCTAGG
CCCTGTCCCCGTCCTGACCCAGGGAGCCCTTGGGACTCCGACTGTCTTACAGGAACCCCC
CTGCCAAGCCTGGACACCTAACGCTGACCCTGAAGAGCCCCCATTTGGACCCCAGTGGCC
CTACCCTAACCTACTCCCCAGTTCCTTAACTTCTGGCCCTTAGTCCAGACCCTCCCTCCC
CACTCCCACTTACCAGGCTCAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAACCCATGGACACGTCGTATCCCCGCGAGGACCCCCGGGCCCCGACGCCCCGCAAG
GCCGACGGTGCCCACACGGCCCTCACGCTGGGGGCGCCGCGACCCCCACCTCGAGACCAC
CTGATCTGGTCGGTGTTCAGCACCCTCTACCTGAACCTGTGCTGCCTTGGCTTCCTGGCG
CTGGCTTACTCCATCAAGGCCCGAGATCAGAAGGTGGCTGGAGACCTGGAGGCAGCCCGG
CGTCTCGGCTCCAAAGCCAAGTGCTACAACATCCTGGCCACCATGTGGGCATTAGTGCCA
CCTCTGCTGCTCCTGGCGCTGGTGGTGACCGGCGCCCTGCACCTGTCCCGGCTGGCAAAG
GGCTCCGCCGCCTTCTTCAGCACCAAGTTCGACGACTCAGACTATGACTGACAGGCTAGG
CCCTGTCCCCGTCCTGACCCAGGGAGCCCTTGGGACTCCGACTGTCTTACAGGAACCCCC
CTGCCAAGCCTGGACACCTAACGCTGACCCTGAAGAGCCCCCATTTGGACCCCAGTGGCC
CTACCCTAACCTACTCCCCAGTTCCTTAACTTCTGGCCCTTAGTCCAGACCCTCCCTCCC
CACTCCCACTTACCAGGCTCAGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|41149589|ref|XP_370597.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|41149589|ref|XP_370597.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               197-449, gnl|bosTau2|chr29 (45557555-45557304)
               

               
               197-449, gnl|Hg17|chr11 (288715-288461)
               

               
               197-449, gnl|Mm7|chr7 (137366713-137366466)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               197-449, gnl|bosTau2|chr29 (45557555-45557304)
               

               
               197-449, gnl|Hg17|chr11 (288715-288461)
               

               
               197-449, gnl|Mm7|chr7 (137366713-137366466)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nca (0.136874)
               

               
               nmm (0.132802)
               

               
               nbm (0.0993246)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)
               

               
               nmm (0.132802)
               

               
               nbm (0.0993246)

	197-449, gnl\|bosTau2\|chr29 (45557555-45557304)
	197-449, gnl\|Hg17\|chr11 (288715-288461)
	197-449, gnl\|Mm7\|chr7 (137366713-137366466)