Non-Coding RNA Search

Ss1.1-rnmm39c_c7.5

Sequence:


               
               GAGATGGTGATGCGCGCCAAGGACAATGTTTACCACCTCGACTGCTTTGCATGTCAGCTT
TGCAATCAGAGATTTTGTGTTGGAGACAAATTTTTCCTAAAGAATAACATGATCCTTTGC
CAGACGGACTACGAGGAAGGTTTAATGAAAGAAGGTTATGCACCCCAGGTTCGCTGATCT
ATCAACATCACCCCATTAAGAATACAAAGCACTACATTCTTTTATCTTTTTTGCTCCACA
TGTATATAAGAATTGACACAGGAATCAACTGAATAGCGTAGATATAGGAAAGCAGGATGG
TTATATGGAATAAAAGGCGGACTGCATCTGTATGTAGTGAAATTGCCCCAGTTCAGAGTT
GAATGTTTATTATTAAAGAAAAAAGTAATGTACATATTGCTGGATTTTTTTGCTTGCTAT
TCGTTTTTTTGTGTCACTTGGCATGAGATGTTTATTTTGGACTATTGTATATAATGTATT
GTAATATTTGAAGCACAAATGTAATACAGTTTTATTGTGTTAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGATGGTGATGCGCGCCAAGGACAATGTTTACCACCTCGACTGCTTTGCATGTCAGCTT
TGCAATCAGAGATTTTGTGTTGGAGACAAATTTTTCCTAAAGAATAACATGATCCTTTGC
CAGACGGACTACGAGGAAGGTTTAATGAAAGAAGGTTATGCACCCCAGGTTCGCTGATCT
ATCAACATCACCCCATTAAGAATACAAAGCACTACATTCTTTTATCTTTTTTGCTCCACA
TGTATATAAGAATTGACACAGGAATCAACTGAATAGCGTAGATATAGGAAAGCAGGATGG
TTATATGGAATAAAAGGCGGACTGCATCTGTATGTAGTGAAATTGCCCCAGTTCAGAGTT
GAATGTTTATTATTAAAGAAAAAAGTAATGTACATATTGCTGGATTTTTTTGCTTGCTAT
TCGTTTTTTTGTGTCACTTGGCATGAGATGTTTATTTTGGACTATTGTATATAATGTATT
GTAATATTTGAAGCACAAATGTAATACAGTTTTATTGTGTTAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62648004|ref|XP_579664.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62648004|ref|XP_579664.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               70-522, gnl|bosTau2|chr5 (54527784-54527332)
               

               
               70-522, gnl|Hg17|chr12 (16595530-16595080)
               

               
               70-522, gnl|Mm7|chr6 (138410761-138410306)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               70-522, gnl|bosTau2|chr5 (54527784-54527332)
               

               
               70-522, gnl|Hg17|chr12 (16595530-16595080)
               

               
               70-522, gnl|Mm7|chr6 (138410761-138410306)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nmm (0.132802)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)
               

               
               ecc (0.115035)

	70-522, gnl\|bosTau2\|chr5 (54527784-54527332)
	70-522, gnl\|Hg17\|chr12 (16595530-16595080)
	70-522, gnl\|Mm7\|chr6 (138410761-138410306)