Non-Coding RNA Search

Ss1.1-rnms14_h10.5

Sequence:


               
               TGATCGCTTGTGTGACCCCTTTCTTTTGATTAAAAAAAAAAAAAAACAAGGATGAACTTC
ATGTTCCTTTAAAATTAGGAATCACACCAAAAGTTGTTCTATAAATAGCAAGAAGGGAAC
CAGAACAAAAGCGATGGCTTTCTTCTTTGGTATTTTTTCTTTGCCGCTATTAAATGTTAT
CTTGTCTTGCAGTGATATGTGTAGGCATGACATTTCTTCACTCGGTAGAAGGGGCGCATA
TGAAAAATCCAGCCTCGTACCCTGTTATTCTGTTAACCGGATCCGAAAGCTATGCTATTT
AGACATAGTCAGGAAAATGAAACTGTCCTTATATATAAACAGAGTACCGACTTGTGTGAA
ATCATGTTGGAGTTTTAAAAAATAAAATGGAAGTGTTTCAGTAAAAAAAGACCAGTGTGG
TCAAATTTCAATTTGTAACTGGCACCCTCACCCTGCCCTGCACATCCCTCACGCTGCAGG
CTCTAGCTTAGGTTTTGTTGCAATCAGTTTGAAGAAGTAATCTGTGAAATCTTGATTTAA
AAAAAAAAGTTCCTGCTCTCCCTTGCAGTTTAGCCCAATGAACCGCTGGAGTTCTAAATC
AGGGTTTATTTCCTTTCTTTTTTTGCTGTGTCGTAGAGGGCTTATAATTTAACCTAGTTC
ACCGAAGCACTATATGGCTAAGAAATGGTACTAAAATTCCCATTTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGATCGCTTGTGTGACCCCTTTCTTTTGATTAAAAAAAAAAAAAAACAAGGATGAACTTC
ATGTTCCTTTAAAATTAGGAATCACACCAAAAGTTGTTCTATAAATAGCAAGAAGGGAAC
CAGAACAAAAGCGATGGCTTTCTTCTTTGGTATTTTTTCTTTGCCGCTATTAAATGTTAT
CTTGTCTTGCAGTGATATGTGTAGGCATGACATTTCTTCACTCGGTAGAAGGGGCGCATA
TGAAAAATCCAGCCTCGTACCCTGTTATTCTGTTAACCGGATCCGAAAGCTATGCTATTT
AGACATAGTCAGGAAAATGAAACTGTCCTTATATATAAACAGAGTACCGACTTGTGTGAA
ATCATGTTGGAGTTTTAAAAAATAAAATGGAAGTGTTTCAGTAAAAAAAGACCAGTGTGG
TCAAATTTCAATTTGTAACTGGCACCCTCACCCTGCCCTGCACATCCCTCACGCTGCAGG
CTCTAGCTTAGGTTTTGTTGCAATCAGTTTGAAGAAGTAATCTGTGAAATCTTGATTTAA
AAAAAAAAGTTCCTGCTCTCCCTTGCAGTTTAGCCCAATGAACCGCTGGAGTTCTAAATC
AGGGTTTATTTCCTTTCTTTTTTTGCTGTGTCGTAGAGGGCTTATAATTTAACCTAGTTC
ACCGAAGCACTATATGGCTAAGAAATGGTACTAAAATTCCCATTTCAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-705, gnl|bosTau2|chr5 (74127605-74126914)
               

               
               1-705, gnl|Hg17|chr22 (44782015-44782661)
               

               
               1-705, gnl|Mm7|chr15 (85747405-85748030)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-705, gnl|bosTau2|chr5 (74127605-74126914)
               

               
               1-705, gnl|Hg17|chr22 (44782015-44782661)
               

               
               1-705, gnl|Mm7|chr15 (85747405-85748030)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nms (0.213858)
               

               
               cst (0.140036)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.213858)
               

               
               cst (0.140036)
               

               
               spc (0.113366)

	1-705, gnl\|bosTau2\|chr5 (74127605-74126914)
	1-705, gnl\|Hg17\|chr22 (44782015-44782661)
	1-705, gnl\|Mm7\|chr15 (85747405-85748030)