Non-Coding RNA Search

Ss1.1-rnms15_e18.5

Sequence:


               
               CCCACGCGTCCGGGCAGTTTCTCCACTACATCTTTCCTTACCAGTTCATGGACTCTCCTG
AGTGGGAATCGCTGCACCCCTCTGAAGAGGGTGTCTTCCAGGTCACTTTGACAGCAGAGA
CCGAATGTAGCTACATTTCCTGGCCCCGGAAAAGTCTCCACCTTCTTCTGGCCAAAGAAC
GATACATCTCTCGTCTCTTCTCCATCCTGCTGGGCTATGACATCTCGGAGAAGCTCTACG
CTCTCAATGACAAGCTCTTTGCCAAGTTTGGGCTGCGCTTCGACATCCGCCTGCCCAGCC
TCTACCATGTTCTGGGTCCTGCTGCCTCAGATACAAGACCAGAGTCAGAGAAGGATGAAG
AGGACGTCTGCGAGCCAGCCATGTCCTCTCCTCAGGCGCTGTCCACATCTGTCCAGCAAA
CACCCCCTGTGTCCCCCCATCCAGCAGCCACCAACCCTCCTGCACCTTCTCCCTGGGTTA
GGATGTCCAGGCCTGACAGCGGCATCCTGGGTGAGGACTCCACCAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCACGCGTCCGGGCAGTTTCTCCACTACATCTTTCCTTACCAGTTCATGGACTCTCCTG
AGTGGGAATCGCTGCACCCCTCTGAAGAGGGTGTCTTCCAGGTCACTTTGACAGCAGAGA
CCGAATGTAGCTACATTTCCTGGCCCCGGAAAAGTCTCCACCTTCTTCTGGCCAAAGAAC
GATACATCTCTCGTCTCTTCTCCATCCTGCTGGGCTATGACATCTCGGAGAAGCTCTACG
CTCTCAATGACAAGCTCTTTGCCAAGTTTGGGCTGCGCTTCGACATCCGCCTGCCCAGCC
TCTACCATGTTCTGGGTCCTGCTGCCTCAGATACAAGACCAGAGTCAGAGAAGGATGAAG
AGGACGTCTGCGAGCCAGCCATGTCCTCTCCTCAGGCGCTGTCCACATCTGTCCAGCAAA
CACCCCCTGTGTCCCCCCATCCAGCAGCCACCAACCCTCCTGCACCTTCTCCCTGGGTTA
GGATGTCCAGGCCTGACAGCGGCATCCTGGGTGAGGACTCCACCAGTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34189903|gb|AAH26911.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34189903|gb|AAH26911.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               99-528, gnl|bosTau2|chr1 (29851313-29850884)
               

               
               99-528, gnl|Hg17|chr3 (120850208-120849779)
               

               
               99-528, gnl|Mm7|chr16 (38080793-38081230)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               99-528, gnl|bosTau2|chr1 (29851313-29850884)
               

               
               99-528, gnl|Hg17|chr3 (120850208-120849779)
               

               
               99-528, gnl|Mm7|chr16 (38080793-38081230)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nms (0.213858)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.213858)

	99-528, gnl\|bosTau2\|chr1 (29851313-29850884)
	99-528, gnl\|Hg17\|chr3 (120850208-120849779)
	99-528, gnl\|Mm7\|chr16 (38080793-38081230)