Non-Coding RNA Search

Ss1.1-rnms26_b19.5

Sequence:


               
               GATCTCAGTGTCTACTTCCTGCCTGTTGCTCGATACATCCGAACTGCCCTCAGTGTTCCC
CGAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTGAGCCGCTCTGCCACAGTTGTCCTG
GCCTTCCTTATGATCTGCGAGAACATGACACTGGTGGAAGCCATCCAGACAGTGCAGGCC
CACCGCGATATCTGCCCCAACTCAGGCTTCCTCCAGCAGCTCCAGGTTCTGGACAACCGA
CTGGGGCGGGAGACGGGGCGGCTCTGACCTGGTGGGCAGCCAGGCTTCCTGACCCTCCAG
CCAGCATGGCCCACCCAGCCAGCCTGGCTCTGGGGACCACAGGTTTTGCTGCTGCCAGTG
AGCTTGTGATGTAAATAGCAAGTCGGGGATTAGCTGAGGCAGAGGCAGGGAGAACTGGGT
GGTGACCTTCAGCAGGTAGATTCCCCTGACCCAATCCAAAGATTCTTTACGCAAAAGAGA
GTTCAGTCTGTCTCTATAATCAAAGGTTCATCATATAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATCTCAGTGTCTACTTCCTGCCTGTTGCTCGATACATCCGAACTGCCCTCAGTGTTCCC
CGAGGCCGCGTGCTGGTACACTGTGCCATGGGGGTGAGCCGCTCTGCCACAGTTGTCCTG
GCCTTCCTTATGATCTGCGAGAACATGACACTGGTGGAAGCCATCCAGACAGTGCAGGCC
CACCGCGATATCTGCCCCAACTCAGGCTTCCTCCAGCAGCTCCAGGTTCTGGACAACCGA
CTGGGGCGGGAGACGGGGCGGCTCTGACCTGGTGGGCAGCCAGGCTTCCTGACCCTCCAG
CCAGCATGGCCCACCCAGCCAGCCTGGCTCTGGGGACCACAGGTTTTGCTGCTGCCAGTG
AGCTTGTGATGTAAATAGCAAGTCGGGGATTAGCTGAGGCAGAGGCAGGGAGAACTGGGT
GGTGACCTTCAGCAGGTAGATTCCCCTGACCCAATCCAAAGATTCTTTACGCAAAAGAGA
GTTCAGTCTGTCTCTATAATCAAAGGTTCATCATATAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61872556|ref|XP_583524.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61872556|ref|XP_583524.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               53-519, gnl|bosTau2|chr28 (24039407-24039864)
               

               
               53-519, gnl|Hg17|chr10 (76524654-76524200)
               

               
               53-519, gnl|Mm7|chr14 (19392536-19392068)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-519, gnl|bosTau2|chr28 (24039407-24039864)
               

               
               53-519, gnl|Hg17|chr10 (76524654-76524200)
               

               
               53-519, gnl|Mm7|chr14 (19392536-19392068)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nms (0.213858)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.213858)

	53-519, gnl\|bosTau2\|chr28 (24039407-24039864)
	53-519, gnl\|Hg17\|chr10 (76524654-76524200)
	53-519, gnl\|Mm7\|chr14 (19392536-19392068)